| Literature DB >> 25995885 |
Joel T Mague1, Shaaban K Mohamed2, Mehmet Akkurt3, Ahmed M M El-Saghier4, Mustafa R Albayati5.
Abstract
In the title compound, [Na(C10H5ClN5)(H2O)2] n , infinite chains of [Na(H2O)2](+) cations having a diamond-shaped cross-section and running parallel to the b axis are formed. O-H⋯N hydrogen bonds to the anions generate layers parallel to (100) which have the chloro-benzene-cyano-ethenyl substituents protruding from both surfaces. The sodium ion makes a short contact of 2.4801 (13) Å with the N atom of the tetra-zolide ring which is syn to the cyano N atom.Entities:
Keywords: crystal structure; hydrogen bonding; sodium salt; tetrazoles
Year: 2015 PMID: 25995885 PMCID: PMC4420058 DOI: 10.1107/S2056989015006325
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| [Na(C10H5ClN5)(H2O)2] | |
| Monoclinic, | Cu |
| Cell parameters from 6311 reflections | |
| θ = 4.0–74.5° | |
| µ = 3.08 mm−1 | |
| β = 92.427 (1)° | |
| Plate, colourless | |
| 0.29 × 0.11 × 0.04 mm |
| Bruker D8 VENTURE PHOTON 100 CMOS diffractometer | 2560 independent reflections |
| Radiation source: INCOATEC IµS micro–focus source | 2249 reflections with |
| Mirror monochromator | |
| Detector resolution: 10.4167 pixels mm-1 | θmax = 74.5°, θmin = 2.0° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 9115 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: mixed | |
| H-atom parameters constrained | |
| 2560 reflections | (Δ/σ)max = 0.001 |
| 172 parameters | Δρmax = 0.36 e Å−3 |
| 0 restraints | Δρmin = −0.37 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.49516 (2) | 0.10717 (11) | 0.35718 (3) | 0.03137 (13) | |
| N1 | 0.86367 (6) | 1.0318 (4) | 0.43087 (8) | 0.0206 (3) | |
| N2 | 0.91834 (6) | 1.1473 (4) | 0.46047 (8) | 0.0220 (3) | |
| N3 | 0.92611 (6) | 1.0749 (4) | 0.54572 (8) | 0.0221 (3) | |
| N4 | 0.87680 (6) | 0.9091 (4) | 0.57424 (8) | 0.0209 (3) | |
| N5 | 0.74923 (7) | 0.5087 (5) | 0.65661 (10) | 0.0382 (4) | |
| C1 | 0.83943 (7) | 0.8871 (4) | 0.50194 (9) | 0.0176 (3) | |
| C2 | 0.77918 (7) | 0.7259 (4) | 0.50140 (9) | 0.0194 (3) | |
| C3 | 0.76111 (7) | 0.6066 (5) | 0.58710 (10) | 0.0242 (3) | |
| C4 | 0.74473 (7) | 0.6828 (4) | 0.42591 (10) | 0.0210 (3) | |
| H4 | 0.7629 | 0.7579 | 0.3729 | 0.025* | |
| C5 | 0.68365 (7) | 0.5378 (4) | 0.41324 (10) | 0.0204 (3) | |
| C6 | 0.66615 (7) | 0.4117 (4) | 0.32820 (10) | 0.0240 (3) | |
| H6 | 0.6941 | 0.4214 | 0.2818 | 0.029* | |
| C7 | 0.60884 (7) | 0.2734 (4) | 0.31088 (10) | 0.0244 (3) | |
| H7 | 0.5977 | 0.1835 | 0.2535 | 0.029* | |
| C8 | 0.56795 (7) | 0.2681 (4) | 0.37836 (11) | 0.0232 (3) | |
| C9 | 0.58373 (7) | 0.3933 (5) | 0.46302 (10) | 0.0254 (3) | |
| H9 | 0.5553 | 0.3870 | 0.5088 | 0.030* | |
| C10 | 0.64131 (7) | 0.5273 (4) | 0.47993 (10) | 0.0243 (3) | |
| H10 | 0.6523 | 0.6135 | 0.5377 | 0.029* | |
| Na1 | 0.92711 (3) | 0.78850 (17) | 0.72191 (4) | 0.02362 (16) | |
| O1 | 0.99226 (5) | 0.9704 (3) | 0.84267 (6) | 0.0211 (2) | |
| H1A | 1.0146 | 0.8147 | 0.8659 | 0.025* | |
| H1B | 0.9717 | 1.0768 | 0.8799 | 0.025* | |
| O2 | 0.86926 (5) | 0.2859 (3) | 0.75583 (7) | 0.0251 (3) | |
| H2A | 0.8664 | 0.3340 | 0.8101 | 0.030* | |
| H2B | 0.8326 | 0.2395 | 0.7434 | 0.030* |
| Cl1 | 0.0220 (2) | 0.0323 (2) | 0.0393 (2) | −0.00816 (16) | −0.00439 (15) | −0.00037 (17) |
| N1 | 0.0179 (6) | 0.0247 (7) | 0.0192 (6) | −0.0011 (5) | 0.0002 (5) | 0.0004 (5) |
| N2 | 0.0194 (6) | 0.0248 (7) | 0.0216 (6) | −0.0015 (5) | 0.0001 (5) | 0.0001 (5) |
| N3 | 0.0196 (6) | 0.0251 (7) | 0.0214 (6) | −0.0024 (5) | −0.0017 (5) | −0.0011 (5) |
| N4 | 0.0190 (6) | 0.0243 (7) | 0.0191 (6) | −0.0017 (5) | −0.0008 (5) | −0.0003 (5) |
| N5 | 0.0268 (8) | 0.0584 (11) | 0.0292 (7) | −0.0056 (8) | −0.0005 (6) | 0.0161 (7) |
| C1 | 0.0171 (7) | 0.0178 (7) | 0.0179 (6) | 0.0020 (6) | 0.0007 (5) | −0.0010 (5) |
| C2 | 0.0181 (7) | 0.0181 (7) | 0.0221 (7) | 0.0018 (6) | 0.0019 (5) | 0.0021 (6) |
| C3 | 0.0161 (7) | 0.0301 (9) | 0.0260 (8) | −0.0015 (6) | −0.0029 (6) | 0.0041 (7) |
| C4 | 0.0195 (7) | 0.0214 (7) | 0.0222 (7) | 0.0002 (6) | 0.0022 (5) | 0.0008 (6) |
| C5 | 0.0187 (7) | 0.0187 (7) | 0.0237 (7) | 0.0013 (6) | −0.0009 (5) | 0.0008 (6) |
| C6 | 0.0226 (8) | 0.0262 (8) | 0.0230 (7) | 0.0024 (7) | 0.0007 (6) | 0.0003 (6) |
| C7 | 0.0243 (8) | 0.0235 (8) | 0.0250 (7) | 0.0014 (7) | −0.0049 (6) | −0.0027 (6) |
| C8 | 0.0190 (7) | 0.0190 (8) | 0.0311 (8) | −0.0018 (6) | −0.0039 (6) | 0.0020 (6) |
| C9 | 0.0201 (8) | 0.0300 (9) | 0.0263 (7) | 0.0005 (7) | 0.0028 (6) | 0.0013 (7) |
| C10 | 0.0232 (8) | 0.0262 (8) | 0.0233 (7) | 0.0001 (7) | −0.0014 (6) | −0.0028 (6) |
| Na1 | 0.0246 (3) | 0.0255 (3) | 0.0205 (3) | 0.0022 (3) | −0.0020 (2) | −0.0011 (2) |
| O1 | 0.0211 (5) | 0.0246 (6) | 0.0176 (5) | 0.0045 (4) | 0.0001 (4) | −0.0001 (4) |
| O2 | 0.0252 (6) | 0.0323 (6) | 0.0175 (5) | 0.0033 (5) | −0.0022 (4) | −0.0019 (5) |
| Cl1—C8 | 1.7359 (16) | C7—C8 | 1.384 (2) |
| N1—C1 | 1.3343 (19) | C7—H7 | 0.9500 |
| N1—N2 | 1.3419 (18) | C8—C9 | 1.389 (2) |
| N2—N3 | 1.3138 (17) | C9—C10 | 1.383 (2) |
| N3—N4 | 1.3449 (18) | C9—H9 | 0.9500 |
| N4—C1 | 1.3374 (19) | C10—H10 | 0.9500 |
| N4—Na1 | 2.4801 (13) | Na1—O2i | 2.3619 (13) |
| N5—C3 | 1.150 (2) | Na1—O1 | 2.3697 (12) |
| C1—C2 | 1.465 (2) | Na1—O2 | 2.3780 (14) |
| C2—C4 | 1.348 (2) | Na1—O1ii | 2.3941 (12) |
| C2—C3 | 1.438 (2) | O1—Na1iii | 2.3941 (12) |
| C4—C5 | 1.462 (2) | O1—H1A | 0.8399 |
| C4—H4 | 0.9500 | O1—H1B | 0.8398 |
| C5—C10 | 1.398 (2) | O2—Na1iv | 2.3619 (13) |
| C5—C6 | 1.404 (2) | O2—H2A | 0.8399 |
| C6—C7 | 1.385 (2) | O2—H2B | 0.8401 |
| C6—H6 | 0.9500 | ||
| C1—N1—N2 | 104.89 (12) | C9—C10—C5 | 120.98 (15) |
| N3—N2—N1 | 109.33 (12) | C9—C10—H10 | 119.5 |
| N2—N3—N4 | 109.65 (12) | C5—C10—H10 | 119.5 |
| C1—N4—N3 | 104.47 (12) | O2i—Na1—O1 | 84.99 (4) |
| C1—N4—Na1 | 161.92 (11) | O2i—Na1—O2 | 107.99 (5) |
| N3—N4—Na1 | 92.06 (8) | O1—Na1—O2 | 112.82 (4) |
| N1—C1—N4 | 111.66 (13) | O2i—Na1—O1ii | 156.29 (5) |
| N1—C1—C2 | 124.39 (13) | O1—Na1—O1ii | 91.35 (4) |
| N4—C1—C2 | 123.95 (13) | O2—Na1—O1ii | 95.05 (4) |
| C4—C2—C3 | 123.10 (14) | O2i—Na1—N4 | 79.46 (4) |
| C4—C2—C1 | 122.35 (13) | O1—Na1—N4 | 149.61 (5) |
| C3—C2—C1 | 114.51 (13) | O2—Na1—N4 | 96.83 (4) |
| N5—C3—C2 | 177.07 (17) | O1ii—Na1—N4 | 92.55 (4) |
| C2—C4—C5 | 129.74 (14) | O2i—Na1—N3 | 84.63 (4) |
| C2—C4—H4 | 115.1 | O1—Na1—N3 | 125.07 (5) |
| C5—C4—H4 | 115.1 | O2—Na1—N3 | 121.70 (4) |
| C10—C5—C6 | 118.38 (14) | O1ii—Na1—N3 | 78.35 (4) |
| C10—C5—C4 | 123.85 (14) | N4—Na1—N3 | 27.99 (4) |
| C6—C5—C4 | 117.74 (14) | Na1—O1—Na1iii | 106.04 (4) |
| C7—C6—C5 | 121.07 (14) | Na1—O1—H1A | 115.7 |
| C7—C6—H6 | 119.5 | Na1iii—O1—H1A | 95.6 |
| C5—C6—H6 | 119.5 | Na1—O1—H1B | 109.0 |
| C8—C7—C6 | 119.03 (14) | Na1iii—O1—H1B | 116.9 |
| C8—C7—H7 | 120.5 | H1A—O1—H1B | 113.0 |
| C6—C7—H7 | 120.5 | Na1iv—O2—Na1 | 107.98 (5) |
| C7—C8—C9 | 121.26 (15) | Na1iv—O2—H2A | 116.7 |
| C7—C8—Cl1 | 119.77 (12) | Na1—O2—H2A | 95.3 |
| C9—C8—Cl1 | 118.96 (12) | Na1iv—O2—H2B | 107.7 |
| C10—C9—C8 | 119.26 (15) | Na1—O2—H2B | 130.0 |
| C10—C9—H9 | 120.4 | H2A—O2—H2B | 98.7 |
| C8—C9—H9 | 120.4 | ||
| C1—N1—N2—N3 | −0.19 (17) | C3—C2—C4—C5 | 4.3 (3) |
| N1—N2—N3—N4 | 0.17 (17) | C1—C2—C4—C5 | −178.16 (15) |
| N1—N2—N3—Na1 | 31.8 (5) | C2—C4—C5—C10 | 23.5 (3) |
| N2—N3—N4—C1 | −0.08 (17) | C2—C4—C5—C6 | −158.45 (17) |
| N2—N3—N4—Na1 | 172.51 (11) | C10—C5—C6—C7 | −1.3 (2) |
| N2—N1—C1—N4 | 0.14 (17) | C4—C5—C6—C7 | −179.43 (15) |
| N2—N1—C1—C2 | 179.72 (14) | C5—C6—C7—C8 | 1.5 (2) |
| N3—N4—C1—N1 | −0.04 (17) | C6—C7—C8—C9 | −1.0 (2) |
| Na1—N4—C1—N1 | −155.5 (3) | C6—C7—C8—Cl1 | 178.18 (13) |
| N3—N4—C1—C2 | −179.62 (14) | C7—C8—C9—C10 | 0.3 (3) |
| Na1—N4—C1—C2 | 24.9 (4) | Cl1—C8—C9—C10 | −178.91 (13) |
| N1—C1—C2—C4 | 6.0 (2) | C8—C9—C10—C5 | −0.1 (3) |
| N4—C1—C2—C4 | −174.48 (15) | C6—C5—C10—C9 | 0.6 (2) |
| N1—C1—C2—C3 | −176.27 (15) | C4—C5—C10—C9 | 178.56 (15) |
| N4—C1—C2—C3 | 3.3 (2) |
| H··· | ||||
| O1—H1 | 0.84 | 2.04 | 2.8443 (17) | 160 |
| O1—H1 | 0.84 | 2.02 | 2.8593 (17) | 175 |
| O2—H2 | 0.84 | 2.44 | 3.1009 (19) | 136 |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| O1H1 | 0.84 | 2.04 | 2.8443(17) | 160 |
| O1H1 | 0.84 | 2.02 | 2.8593(17) | 175 |
| O2H2 | 0.84 | 2.44 | 3.1009(19) | 136 |
Symmetry codes: (i) ; (ii) .