Literature DB >> 25994114

Evaluating endoglucanase Cel7B-lignin interaction mechanisms and kinetics using quartz crystal microgravimetry.

Katherine A Pfeiffer1,2, Hagit Sorek2, Christine M Roche1,2, Kathryn L Strobel1,2, Harvey W Blanch1,2, Douglas S Clark3,4.   

Abstract

The kinetics and mechanisms of protein interactions with solid surfaces are important to fields as diverse as industrial biocatalysis, biomedical engineering, food science, and cell biology. The nonproductive adsorption of cellulase enzymes to lignin, a plant cell wall polymer, reduces their effectiveness in saccharifying biomass. Cellulase has been shown to interact with lignin, but the heterogeneity of lignin surfaces, challenges in measuring irreversible components of these interactions, and fast adsorption rates make quantifying the reaction kinetics difficult. This work employs quartz crystal microgravimetry with dissipation monitoring (QCM-D) for real-time measurement of adsorbed mass on a flat lignin surface. We have developed a method for casting homogeneous lignin films that are chemically similar to lignin found in pretreated biomass, and used QCM-D to compare three models of reversible-irreversible binding behavior: a single-site transition model, a transition model with changing adsorbate footprint, and a two-site transition model. Of the three models tested, the two-site transition model provides the only kinetic mechanism able to describe the behavior of Cel7B binding to lignin. While the direct implications of lignin-cellulase interactions may be limited to biomass deconstruction for renewable energy and green chemistry, the analytical and experimental methods demonstrated in this work are relevant to any system in which the kinetics and reaction mechanism of reversible and irreversible protein adsorption at a solid-liquid interface are important.
© 2015 Wiley Periodicals, Inc.

Entities:  

Keywords:  cellulase; kinetic modeling; lignin; nonspecific adsorption; quartz crystal gravimetry; surface kinetics

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Year:  2015        PMID: 25994114     DOI: 10.1002/bit.25657

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  5 in total

1.  Enzymes in Commercial Cellulase Preparations Bind Differently to Dioxane Extracted Lignins.

Authors:  John M Yarbrough; Ashutosh Mittal; Rui Katahira; Elisabeth Mansfield; Larry E Taylor; Stephen R Decker; Michael E Himmel; Todd Vinzant
Journal:  Curr Biotechnol       Date:  2017

2.  Inhibitory effect of lignin on the hydrolysis of xylan by thermophilic and thermolabile GH11 xylanases.

Authors:  Miriam Kellock; Jenni Rahikainen; Anna S Borisova; Sanni Voutilainen; Anu Koivula; Kristiina Kruus; Kaisa Marjamaa
Journal:  Biotechnol Biofuels Bioprod       Date:  2022-05-14

3.  Structural insights into the affinity of Cel7A carbohydrate-binding module for lignin.

Authors:  Kathryn L Strobel; Katherine A Pfeiffer; Harvey W Blanch; Douglas S Clark
Journal:  J Biol Chem       Date:  2015-07-24       Impact factor: 5.157

4.  New perspective on glycoside hydrolase binding to lignin from pretreated corn stover.

Authors:  John M Yarbrough; Ashutosh Mittal; Elisabeth Mansfield; Larry E Taylor; Sarah E Hobdey; Deanne W Sammond; Yannick J Bomble; Michael F Crowley; Stephen R Decker; Michael E Himmel; Todd B Vinzant
Journal:  Biotechnol Biofuels       Date:  2015-12-18       Impact factor: 6.040

5.  Real-time adsorption and action of expansin on cellulose.

Authors:  Yuhao Duan; Yuanyuan Ma; Xudong Zhao; Renliang Huang; Rongxin Su; Wei Qi; Zhimin He
Journal:  Biotechnol Biofuels       Date:  2018-11-22       Impact factor: 6.040

  5 in total

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