Literature DB >> 25988201

Synthesis of model humic substances: a mechanistic study using controllable H/D exchange and Fourier transform ion cyclotron resonance mass spectrometry.

Alexander Ya Zherebker1, David Airapetyan, Andrey I Konstantinov, Yury I Kostyukevich, Alexey S Kononikhin, Igor A Popov, Kirill V Zaitsev, Eugene N Nikolaev, Irina V Perminova.   

Abstract

The products of the oxidative coupling of phenols are frequently used as synthetic analogues to natural humic substances (HS) for biomedical research. However, their molecular compositions and exact structures remain largely unknown. The objective of this study was to develop a novel approach for the molecular-level analysis of phenolic polymerisates that is capable of inventorying molecular constituents and resolving their distinct structural formulas. For this purpose, we have synthesized the model HS using the oxidative coupling of a specifically designed phenylpropanoic monomer, 3-(4-hydroxy-3-methoxyphenyl)-3-oxopropionic acid, to hydroquinone. We have characterized the synthesized model HS using high resolution Fourier transform ion cyclotron resonance mass spectrometry (FTICR MS), (1)H NMR spectroscopy, and controllable hydrogen/deuterium (H/D) exchange. We succeeded in the molecular inventory of the model HS. The assigned molecular formulas occupied the substantial space of CHO compositions in the Van Krevelen diagram with a maximum density found in the regions of tannins and lignins, resembling those of natural HS. To identify the exact structural formulas of the individual constituents in the model HS, we have applied selective H/D exchange of non-labile backbone protons by a choice of basic or acidic catalytic conditions followed by FTICR MS. The determined formulas allowed us to verify the proposed pathways of hydroxylation and carboxylation in the course of the phenolic coupling and to identify the acetylation of aromatic rings as an important side reaction. We conclude that the proposed analytical approach may be used to identify the molecular carriers of biological activity within the phenolic polymerisates and eventually within natural HS.

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Year:  2015        PMID: 25988201     DOI: 10.1039/c5an00602c

Source DB:  PubMed          Journal:  Analyst        ISSN: 0003-2654            Impact factor:   4.616


  6 in total

1.  Design and Validation of In-Source Atmospheric Pressure Photoionization Hydrogen/Deuterium Exchange Mass Spectrometry with Continuous Feeding of D2O.

Authors:  Thamina Acter; Seulgidaun Lee; Eunji Cho; Maeng-Joon Jung; Sunghwan Kim
Journal:  J Am Soc Mass Spectrom       Date:  2017-10-27       Impact factor: 3.109

2.  CID fragmentation, H/D exchange and supermetallization of Barnase-Barstar complex.

Authors:  Yury Kostyukevich; Aleksej A Shulga; Alexey Kononikhin; Igor Popov; Eugene Nikolaev; Sergey Deyev
Journal:  Sci Rep       Date:  2017-07-21       Impact factor: 4.379

3.  Antiviral activity of natural humic substances and shilajit materials against HIV-1: Relation to structure.

Authors:  Yury V Zhernov; Andrey I Konstantinov; Alexander Zherebker; Eugene Nikolaev; Alexey Orlov; Mikhail I Savinykh; Galina V Kornilaeva; Eduard V Karamov; Irina V Perminova
Journal:  Environ Res       Date:  2020-10-14       Impact factor: 6.498

4.  Speciation of organosulfur compounds in carbonaceous chondrites.

Authors:  Alexander Zherebker; Yury Kostyukevich; Dmitry S Volkov; Ratibor G Chumakov; Lukas Friederici; Christopher P Rüger; Alexey Kononikhin; Oleg Kharybin; Alexander Korochantsev; Ralf Zimmermann; Irina V Perminova; Eugene Nikolaev
Journal:  Sci Rep       Date:  2021-04-01       Impact factor: 4.379

5.  Mass Difference Matching Unfolds Hidden Molecular Structures of Dissolved Organic Matter.

Authors:  Carsten Simon; Kai Dührkop; Daniel Petras; Vanessa-Nina Roth; Sebastian Böcker; Pieter C Dorrestein; Gerd Gleixner
Journal:  Environ Sci Technol       Date:  2022-07-14       Impact factor: 11.357

6.  Derivatisation of parthenolide to address chemoresistant chronic lymphocytic leukaemia.

Authors:  Xingjian Li; Daniel T Payne; Badarinath Ampolu; Nicholas Bland; Jane T Brown; Mark J Dutton; Catherine A Fitton; Abigail Gulliver; Lee Hale; Daniel Hamza; Geraint Jones; Rebecca Lane; Andrew G Leach; Louise Male; Elena G Merisor; Michael J Morton; Alex S Quy; Ruth Roberts; Rosanna Scarll; Timothy Schulz-Utermoehl; Tatjana Stankovic; Brett Stevenson; John S Fossey; Angelo Agathanggelou
Journal:  Medchemcomm       Date:  2019-08-01       Impact factor: 3.597

  6 in total

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