Literature DB >> 25985140

Natural alleles of a proteasome α2 subunit gene contribute to thermotolerance and adaptation of African rice.

Xin-Min Li1, Dai-Yin Chao1, Yuan Wu1, Xuehui Huang2, Ke Chen1, Long-Gang Cui1, Lei Su1, Wang-Wei Ye1, Hao Chen1, Hua-Chang Chen1, Nai-Qian Dong1, Tao Guo1, Min Shi1, Qi Feng2, Peng Zhang1, Bin Han3, Jun-Xiang Shan1, Ji-Ping Gao1, Hong-Xuan Lin4.   

Abstract

Global warming threatens many aspects of human life, for example, by reducing crop yields. Breeding heat-tolerant crops using genes conferring thermotolerance is a fundamental way to help deal with this challenge. Here we identify a major quantitative trait locus (QTL) for thermotolerance in African rice (Oryza glaberrima), Thermo-tolerance 1 (TT1), which encodes an α2 subunit of the 26S proteasome involved in the degradation of ubiquitinated proteins. Ubiquitylome analysis indicated that OgTT1 protects cells from heat stress through more efficient elimination of cytotoxic denatured proteins and more effective maintenance of heat-response processes than achieved with OsTT1. Variation in TT1 has been selected for on the basis of climatic temperature and has had an important role in local adaptation during rice evolution. In addition, we found that overexpression of OgTT1 was associated with markedly enhanced thermotolerance in rice, Arabidopsis and Festuca elata. This discovery may lead to an increase in crop security in the face of the ongoing threat of global warming.

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Year:  2015        PMID: 25985140     DOI: 10.1038/ng.3305

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  48 in total

1.  Identification of the 19S regulatory particle subunits from the rice 26S proteasome.

Authors:  Tadashi Shibahara; Hiroshi Kawasaki; Hisashi Hirano
Journal:  Eur J Biochem       Date:  2002-03

Review 2.  The ubiquitin/26S proteasome pathway, the complex last chapter in the life of many plant proteins.

Authors:  Richard D Vierstra
Journal:  Trends Plant Sci       Date:  2003-03       Impact factor: 18.313

3.  Genome-wide association studies of 14 agronomic traits in rice landraces.

Authors:  Xuehui Huang; Xinghua Wei; Tao Sang; Qiang Zhao; Qi Feng; Yan Zhao; Canyang Li; Chuanrang Zhu; Tingting Lu; Zhiwu Zhang; Meng Li; Danlin Fan; Yunli Guo; Ahong Wang; Lu Wang; Liuwei Deng; Wenjun Li; Yiqi Lu; Qijun Weng; Kunyan Liu; Tao Huang; Taoying Zhou; Yufeng Jing; Wei Li; Zhang Lin; Edward S Buckler; Qian Qian; Qi-Fa Zhang; Jiayang Li; Bin Han
Journal:  Nat Genet       Date:  2010-10-24       Impact factor: 38.330

4.  The proteasome antechamber maintains substrates in an unfolded state.

Authors:  Amy M Ruschak; Tomasz L Religa; Sarah Breuer; Susanne Witt; Lewis E Kay
Journal:  Nature       Date:  2010-10-14       Impact factor: 49.962

5.  Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.

Authors:  Aravind Subramanian; Pablo Tamayo; Vamsi K Mootha; Sayan Mukherjee; Benjamin L Ebert; Michael A Gillette; Amanda Paulovich; Scott L Pomeroy; Todd R Golub; Eric S Lander; Jill P Mesirov
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-30       Impact factor: 11.205

6.  The Arabidopsis proteasome RPT5 subunits are essential for gametophyte development and show accession-dependent redundancy.

Authors:  Jean-Luc Gallois; Anouchka Guyon-Debast; Alain Lécureuil; Daniel Vezon; Virginie Carpentier; Sandrine Bonhomme; Philippe Guerche
Journal:  Plant Cell       Date:  2009-02-17       Impact factor: 11.277

7.  The RPN5 subunit of the 26s proteasome is essential for gametogenesis, sporophyte development, and complex assembly in Arabidopsis.

Authors:  Adam J Book; Jan Smalle; Kwang-Hee Lee; Peizhen Yang; Joseph M Walker; Sarah Casper; James H Holmes; Laura A Russo; Zachri W Buzzinotti; Pablo D Jenik; Richard D Vierstra
Journal:  Plant Cell       Date:  2009-02-27       Impact factor: 11.277

8.  Distinct evolutionary patterns of Oryza glaberrima deciphered by genome sequencing and comparative analysis.

Authors:  Hiroaki Sakai; Hiroshi Ikawa; Tsuyoshi Tanaka; Hisataka Numa; Hiroshi Minami; Masaki Fujisawa; Michie Shibata; Kanako Kurita; Ari Kikuta; Masao Hamada; Hiroyuki Kanamori; Nobukazu Namiki; Jianzhong Wu; Takeshi Itoh; Takashi Matsumoto; Takuji Sasaki
Journal:  Plant J       Date:  2011-03-21       Impact factor: 6.417

Review 9.  Physiological, biochemical, and molecular mechanisms of heat stress tolerance in plants.

Authors:  Mirza Hasanuzzaman; Kamrun Nahar; Md Mahabub Alam; Rajib Roychowdhury; Masayuki Fujita
Journal:  Int J Mol Sci       Date:  2013-05-03       Impact factor: 5.923

10.  A map of rice genome variation reveals the origin of cultivated rice.

Authors:  Xuehui Huang; Nori Kurata; Xinghua Wei; Zi-Xuan Wang; Ahong Wang; Qiang Zhao; Yan Zhao; Kunyan Liu; Hengyun Lu; Wenjun Li; Yunli Guo; Yiqi Lu; Congcong Zhou; Danlin Fan; Qijun Weng; Chuanrang Zhu; Tao Huang; Lei Zhang; Yongchun Wang; Lei Feng; Hiroyasu Furuumi; Takahiko Kubo; Toshie Miyabayashi; Xiaoping Yuan; Qun Xu; Guojun Dong; Qilin Zhan; Canyang Li; Asao Fujiyama; Atsushi Toyoda; Tingting Lu; Qi Feng; Qian Qian; Jiayang Li; Bin Han
Journal:  Nature       Date:  2012-10-03       Impact factor: 49.962

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  68 in total

Review 1.  It's Time for Some "Site"-Seeing: Novel Tools to Monitor the Ubiquitin Landscape in Arabidopsis thaliana.

Authors:  Alan Walton; Elisabeth Stes; Nicolas Cybulski; Michiel Van Bel; Sabrina Iñigo; Astrid Nagels Durand; Evy Timmerman; Jefri Heyman; Laurens Pauwels; Lieven De Veylder; Alain Goossens; Ive De Smet; Frederik Coppens; Sofie Goormachtig; Kris Gevaert
Journal:  Plant Cell       Date:  2016-01-07       Impact factor: 11.277

Review 2.  New clues into the mechanisms of rice domestication.

Authors:  Padubidri V Shivaprasad
Journal:  J Biosci       Date:  2019-06       Impact factor: 1.826

3.  MADS1 maintains barley spike morphology at high ambient temperatures.

Authors:  Gang Li; Hendrik N J Kuijer; Xiujuan Yang; Huiran Liu; Chaoqun Shen; Jin Shi; Natalie Betts; Matthew R Tucker; Wanqi Liang; Robbie Waugh; Rachel A Burton; Dabing Zhang
Journal:  Nat Plants       Date:  2021-06-28       Impact factor: 15.793

4.  Dek40 Encodes a PBAC4 Protein Required for 20S Proteasome Biogenesis and Seed Development.

Authors:  Guifeng Wang; Wei Fan; Mingyan Ou; Xuewei Wang; Hongli Qin; Fan Feng; Yulong Du; Jiacheng Ni; Jihua Tang; Rentao Song; Gang Wang
Journal:  Plant Physiol       Date:  2019-06-12       Impact factor: 8.340

5.  Mapping quantitative trait loci for heat tolerance at the booting stage using chromosomal segment substitution lines in rice.

Authors:  Shan Zhu; Renliang Huang; Hnin Pwint Wai; Hongliang Xiong; Xianhua Shen; Haohua He; Song Yan
Journal:  Physiol Mol Biol Plants       Date:  2017-09-21

6.  Construction of introgression lines of Oryza rufipogon and evaluation of important agronomic traits.

Authors:  Guannan Qin; Hung Manh Nguyen; Sinh Ngoc Luu; Yanwei Wang; Zhiguo Zhang
Journal:  Theor Appl Genet       Date:  2018-11-21       Impact factor: 5.699

7.  Lineage-specific gene acquisition or loss is involved in interspecific hybrid sterility in rice.

Authors:  Yohei Koide; Atsushi Ogino; Takanori Yoshikawa; Yuki Kitashima; Nozomi Saito; Yoshitaka Kanaoka; Kazumitsu Onishi; Yoshihiro Yoshitake; Takuji Tsukiyama; Hiroki Saito; Masayoshi Teraishi; Yoshiyuki Yamagata; Aiko Uemura; Hiroki Takagi; Yoriko Hayashi; Tomoko Abe; Yoshimichi Fukuta; Yutaka Okumoto; Akira Kanazawa
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-14       Impact factor: 11.205

8.  Ribosomal RNA Biogenesis and Its Response to Chilling Stress in Oryza sativa.

Authors:  Runlai Hang; Zhen Wang; Xian Deng; Chunyan Liu; Bin Yan; Chao Yang; Xianwei Song; Beixin Mo; Xiaofeng Cao
Journal:  Plant Physiol       Date:  2018-03-19       Impact factor: 8.340

9.  Overexpression of receptor-like kinase ERECTA improves thermotolerance in rice and tomato.

Authors:  Hui Shen; Xiangbin Zhong; Fangfang Zhao; Yanmei Wang; Bingxiao Yan; Qun Li; Genyun Chen; Bizeng Mao; Jianjun Wang; Yangsheng Li; Guoying Xiao; Yuke He; Han Xiao; Jianming Li; Zuhua He
Journal:  Nat Biotechnol       Date:  2015-08-17       Impact factor: 54.908

Review 10.  Molecular and genetic bases of heat stress responses in crop plants and breeding for increased resilience and productivity.

Authors:  Michela Janni; Mariolina Gullì; Elena Maestri; Marta Marmiroli; Babu Valliyodan; Henry T Nguyen; Nelson Marmiroli
Journal:  J Exp Bot       Date:  2020-06-26       Impact factor: 6.992

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