| Literature DB >> 25977924 |
Dong Li1, Shu-Hong Hao2, Yan Sun2, Chun-Mei Hu2, Zhi-Hua Ma1, Zhi Ming Wang3, Jie Liu4, Hong Bo Liu5, Ming Ye5, Yu Fei Zhang3, Dong Sheng Yang3, Guang Shi2.
Abstract
BACKGROUND: This meta-analysis investigated the association between functional COX-2 gene polymorphisms and the risk of oral cancer.Entities:
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Year: 2015 PMID: 25977924 PMCID: PMC4419230 DOI: 10.1155/2015/580652
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Figure 1Flow chart shows study selection procedure. Seven studies were included in this meta-analysis.
Figure 2CASP scores for 7 eligible studies for the relationship between functional COX-2 gene polymorphisms and susceptibility to oral cancer.
Baseline characteristics of the eligible studies for the relationship between functional COX-2 gene polymorphisms and susceptibility to oral cancer.
| First author | Year | Country | Ethnicity | Disease | Genotyping method | SNP |
|---|---|---|---|---|---|---|
| Campa [ | 2007 | France | Caucasians | OSCC | TaqMan assay | +837 T > C (rs5275) |
|
Chiang-a [ | 2008 | Taiwan, China | Asians | OSCC | PCR-RFLP | 1195 A > G (rs689466) |
| Chiang-b [ | 2008 | Taiwan, China | Asians | OSCC | PCR-RFLP | −765 G > C (rs20417) |
| Lin [ | 2008 | Taiwan, China | Asians | OSCC | PCR-RFLP | −765 G > C (rs20417) |
| Pu-a [ | 2009 | USA | Caucasians | OPL | TaqMan assay | −765 G > C (rs20417) |
| Pu-b [ | 2009 | USA | Caucasians | OPL | TaqMan assay | +837 T > C (rs5275) |
| Mittal-a [ | 2010 | India | Asians | OSCC | PCR-RFLP | 1195 A > G (rs689466) |
| Mittal-b [ | 2010 | India | Asians | OSCC | PCR-RFLP | −765 G > C (rs20417) |
| Mittal-c [ | 2010 | India | Asians | OSCC | PCR-RFLP | +837 T > C (rs5275) |
| Niu [ | 2011 | China | Asians | OSCC | PCR-RFLP | 1195 A > G (rs689466) |
| Niu [ | 2012 | China | Asians | OSCC | TaqMan assay | +837 T > C (rs5275) |
Note. OSCC: oral squamous cell carcinoma; OPL: oral precancerous lesions; PCR-RFLP: restriction fragment length polymorphism.
Figure 3Forest analyses in present meta-analysis investigate the association between COX-2 polymorphism and susceptibility to oral cancer ((a) +837 T > C (rs5275) in allele model; (b) +837 T > C (rs5275) in dominant model; (c) −765 G > C (rs20417) in allele model; (d) −765 G > C (rs20417) in dominant model; (e) 1195 A > G (rs689466) in allele model; (f) 1195 A > G (rs689466) in dominant model).
Comparisons of genotype and allele frequencies between the case and the control groups for the relationship between functional COX-2 gene polymorphisms and susceptibility to oral cancer.
| SNP gene model | +837 T > C (rs5275) | −765 G > C (rs20417) | 1195 G > A (rs689466) | ||||||
|---|---|---|---|---|---|---|---|---|---|
| RR | 95% CI |
| RR | 95% CI |
| RR | 95% CI |
| |
| M allele versus W allele (allele model) | 0.87 | 0.77–0.98 | 0.021 | 0.66 | 0.58–0.76 | <0.001 | 0.94 | 0.87–1.02 | 0.164 |
| WM + MM versus WW (dominant model) | 0.53 | 0.40–0.72 | <0.001 | 0.72 | 0.64–0.82 | <0.001 | 0.95 | 0.89–1.02 | 0.186 |
| MM versus WW (homozygous model) | 0.68 | 0.47–0.99 | 0.042 | 0.26 | 0.16–0.43 | <0.001 | 0.85 | 0.71–1.01 | 0.069 |
| MM versus WM (heterozygous model) | 1.01 | 0.92–1.11 | 0.806 | 1.11 | 1.03–1.18 | 0.004 | 1.01 | 0.93–1.10 | 0.734 |
| MM versus WW + WM (recessive model) | 0.72 | 0.49–1.06 | 0.093 | 0.32 | 0.19–0.54 | <0.001 | 0.91 | 0.73–1.12 | 0.363 |
RR: relative risk; 95% CI: 95% confidential intervals.
Meta-regression analyses on SNP, detecting method, year, country, ethnicity and sample size for exploring potential source of heterogeneity between functional COX-2 gene polymorphisms and susceptibility to oral cancer.
| Heterogeneity factors | Coefficient | SE |
|
| 95% CI | |
|---|---|---|---|---|---|---|
| LL | UL | |||||
| SNP | −0.071 | 0.082 | −0.86 | 0.805 | −0.299 | 0.158 |
| Detecting method | 1.964 | 0.812 | 2.42 | 0.181 | −0.291 | 4.22 |
| Year | 0.301 | 0.130 | 2.32 | 0.206 | −0.059 | 0.661 |
| Country | 0.124 | 0.098 | 1.27 | 0.588 | −0.148 | 0.395 |
| Ethnicity | −2.103 | 0.962 | −2.19 | 0.232 | −4.774 | 0.568 |
| Sample size | 0.002 | 0.001 | 2.21 | 0.230 | −0.001 | 0.004 |
Note. SE: standard error; LL: lower limit; UL: upper limit; SNP: single-nucleotide polymorphism.
Figure 4Sensitivity analysis in present meta-analysis investigates the association between COX-2 polymorphisms and susceptibility to oral cancer ((a) +837 T > C (rs5275) in allele model; (b) +837 T > C (rs5275) in dominant model; (c) −765 G > C (rs20417) in allele model; (d) −765 G > C (rs20417) in dominant model; (e) 1195 A > G (rs689466) in allele model; (f) 1195 A > G (rs689466) in dominant model).
Figure 5Metaregression analysis in present meta-analysis investigates association between COX-2 polymorphisms and susceptibility to oral cancer ((a) +837 T > C (rs5275) in allele model; (b) +837 T > C (rs5275) in dominant model; (c) −765 G > C (rs20417) in allele model; (d) −765 G > C (rs20417) in dominant model; (e) 1195 A > G (rs689466) in allele model; (f) 1195 A > G (rs689466) in dominant model).
Figure 6Funnel plot of publication in present meta-analysis investigates the association between COX-2 polymorphisms and susceptibility to oral cancer ((a) +837 T > C (rs5275) in allele model; (b) +837 T > C (rs5275) in dominant model; (c) −765 G > C (rs20417) in allele model; (d) −765 G > C (rs20417) in dominant model; (e) 1195 A > G (rs689466) in allele model; (f) 1195 A > G (rs689466) in dominant model).