Literature DB >> 25977733

A Multiscale Computational Framework to Understand Vascular Adaptation.

Marc Garbey1, Mahbubur Rahman2, Scott A Berceli3.   

Abstract

The failure rate for vascular interventions (vein bypass grafting, arterial angioplasty/stenting) remains unacceptably high. Over the past two decades, researchers have applied a wide variety of approaches to investigate the primary failure mechanisms, neointimal hyperplasia and aberrant remodeling of the wall, in an effort to identify novel therapeutic strategies. Despite incremental progress, specific cause/effect linkages among the primary drivers of the pathology, (hemodynamic factors, inflammatory biochemical mediators, cellular effectors) and vascular occlusive phenotype remain lacking. We propose a multiscale computational framework of vascular adaptation to develop a bridge between theory and experimental observation and to provide a method for the systematic testing of relevant clinical hypotheses. Cornerstone to our model is a feedback mechanism between environmental conditions and dynamic tissue plasticity described at the cellular level with an agent based model. Our implementation (i) is modular, (ii) starts from basic mechano-biology principle at the cell level and (iii) facilitates the agile development of the model.

Entities:  

Year:  2015        PMID: 25977733      PMCID: PMC4426998          DOI: 10.1016/j.jocs.2015.02.002

Source DB:  PubMed          Journal:  J Comput Sci


  29 in total

1.  Atrophic remodeling of the artery-cuffed artery.

Authors:  I M Bayer; S L Adamson; B L Langille
Journal:  Arterioscler Thromb Vasc Biol       Date:  1999-06       Impact factor: 8.311

2.  Flow-induced neointimal regression in baboon polytetrafluoroethylene grafts is associated with decreased cell proliferation and increased apoptosis.

Authors:  Scott A Berceli; Mark G Davies; Richard D Kenagy; Alexander W Clowes
Journal:  J Vasc Surg       Date:  2002-12       Impact factor: 4.268

3.  Mechanical interactions between collagen and proteoglycans: implications for the stability of lung tissue.

Authors:  Francisco S A Cavalcante; Satoru Ito; Kelly Brewer; Hiroaki Sakai; Adriano M Alencar; Murilo P Almeida; José S Andrade; Arnab Majumdar; Edward P Ingenito; Béla Suki
Journal:  J Appl Physiol (1985)       Date:  2004-09-24

4.  Multi-cell agent-based simulation of the microvasculature to study the dynamics of circulating inflammatory cell trafficking.

Authors:  Alexander M Bailey; Bryan C Thorne; Shayn M Peirce
Journal:  Ann Biomed Eng       Date:  2007-04-10       Impact factor: 3.934

5.  A multi-scale mechanobiological model of in-stent restenosis: deciphering the role of matrix metalloproteinase and extracellular matrix changes.

Authors:  Houman Zahedmanesh; Hans Van Oosterwyck; Caitríona Lally
Journal:  Comput Methods Biomech Biomed Engin       Date:  2012-09-12       Impact factor: 1.763

6.  Mechanical factors associated with the development of intimal and medial thickening in vein grafts subjected to arterial pressure. A model of arteries exposed to hypertension.

Authors:  P B Dobrin
Journal:  Hypertension       Date:  1995-07       Impact factor: 10.190

Review 7.  Intimal hyperplasia, vascular modeling, and the restenosis problem.

Authors:  S Glagov
Journal:  Circulation       Date:  1994-06       Impact factor: 29.690

8.  Rule-Based Simulation of Multi-Cellular Biological Systems-A Review of Modeling Techniques.

Authors:  Minki Hwang; Marc Garbey; Scott A Berceli; Roger Tran-Son-Tay
Journal:  Cell Mol Bioeng       Date:  2009-09       Impact factor: 2.321

9.  A dynamical system that describes vein graft adaptation and failure.

Authors:  Marc Garbey; Scott A Berceli
Journal:  J Theor Biol       Date:  2013-07-16       Impact factor: 2.691

10.  A hybrid cellular automaton model of clonal evolution in cancer: the emergence of the glycolytic phenotype.

Authors:  P Gerlee; A R A Anderson
Journal:  J Theor Biol       Date:  2007-11-04       Impact factor: 2.691

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  8 in total

1.  Mechanobiological model of arterial growth and remodeling.

Authors:  Maziyar Keshavarzian; Clark A Meyer; Heather N Hayenga
Journal:  Biomech Model Mechanobiol       Date:  2017-08-19

2.  Vascular Adaptation: Pattern Formation and Cross Validation between an Agent Based Model and a Dynamical System.

Authors:  Marc Garbey; Stefano Casarin; Scott A Berceli
Journal:  J Theor Biol       Date:  2017-06-21       Impact factor: 2.691

3.  Multi-scale Modeling of the Cardiovascular System: Disease Development, Progression, and Clinical Intervention.

Authors:  Yanhang Zhang; Victor H Barocas; Scott A Berceli; Colleen E Clancy; David M Eckmann; Marc Garbey; Ghassan S Kassab; Donna R Lochner; Andrew D McCulloch; Roger Tran-Son-Tay; Natalia A Trayanova
Journal:  Ann Biomed Eng       Date:  2016-05-02       Impact factor: 3.934

4.  Multiscale Computational Analysis of Right Ventricular Mechanoenergetics.

Authors:  Ryan J Pewowaruk; Jennifer L Philip; Shivendra G Tewari; Claire S Chen; Mark S Nyaeme; Zhijie Wang; Diana M Tabima; Anthony J Baker; Daniel A Beard; Naomi C Chesler
Journal:  J Biomech Eng       Date:  2018-08-01       Impact factor: 2.097

Review 5.  Computational modeling for cardiovascular tissue engineering: the importance of including cell behavior in growth and remodeling algorithms.

Authors:  Sandra Loerakker; Tommaso Ristori
Journal:  Curr Opin Biomed Eng       Date:  2020-09

6.  Patient-Specific, Multi-Scale Modeling of Neointimal Hyperplasia in Vein Grafts.

Authors:  Francesca Donadoni; Cesar Pichardo-Almarza; Matthew Bartlett; Alan Dardik; Shervanthi Homer-Vanniasinkam; Vanessa Díaz-Zuccarini
Journal:  Front Physiol       Date:  2017-04-18       Impact factor: 4.566

7.  Multiscale Modeling of Vascular Remodeling Induced by Wall Shear Stress.

Authors:  Shiliang Chen; Hanbing Zhang; Qianwen Hou; Yu Zhang; Aike Qiao
Journal:  Front Physiol       Date:  2022-01-27       Impact factor: 4.566

8.  Impaired Myofilament Contraction Drives Right Ventricular Failure Secondary to Pressure Overload: Model Simulations, Experimental Validation, and Treatment Predictions.

Authors:  Jennifer L Philip; Ryan J Pewowaruk; Claire S Chen; Diana M Tabima; Daniel A Beard; Anthony J Baker; Naomi C Chesler
Journal:  Front Physiol       Date:  2018-06-27       Impact factor: 4.566

  8 in total

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