| Literature DB >> 25972468 |
Aodhán D Butler1, John A Cunningham2, Graham E Budd3, Philip C J Donoghue4.
Abstract
Exceptionally preserved fossils provide major insights into the evolutionary history of life. Microbial activity is thought to play a pivotal role in both the decay of organisms and the preservation of soft tissue in the fossil record, though this has been the subject of very little experimental investigation. To remedy this, we undertook an experimental study of the decay of the brine shrimp Artemia, examining the roles of autolysis, microbial activity, oxygen diffusion and reducing conditions. Our findings indicate that endogenous gut bacteria are the main factor controlling decay. Following gut wall rupture, but prior to cuticle failure, gut-derived microbes spread into the body cavity, consuming tissues and forming biofilms capable of mediating authigenic mineralization, that pseudomorph tissues and structures such as limbs and the haemocoel. These observations explain patterns observed in exceptionally preserved fossil arthropods. For example, guts are preserved relatively frequently, while preservation of other internal anatomy is rare. They also suggest that gut-derived microbes play a key role in the preservation of internal anatomy and that differential preservation between exceptional deposits might be because of factors that control autolysis and microbial activity. The findings also suggest that the evolution of a through gut and its bacterial microflora increased the potential for exceptional fossil preservation in bilaterians, providing one explanation for the extreme rarity of internal preservation in those animals that lack a through gut.Entities:
Keywords: Cambrian explosion; bilateria; metazoa; palaeobiology; taphonomy
Mesh:
Year: 2015 PMID: 25972468 PMCID: PMC4455810 DOI: 10.1098/rspb.2015.0476
Source DB: PubMed Journal: Proc Biol Sci ISSN: 0962-8452 Impact factor: 5.349
Description of semi-quantitative indices of decay.
| gross morphology | internal anatomy | internal microbial infiltration index | surface microbial cover index | |
|---|---|---|---|---|
| 1 | fresh ( | fresh | no microbes in body cavity, restricted to gut ( | none/isolated microbes |
| 2 | distal thoracopods shrivel and mat ( | shrinkage of cells away from distal thoracopod setae, cells/nuclei in integument still visible under fluorescent microscopy, some evidence of degradation by autolysis | microbes escape from hindgut, microbes visible in haemocoel and telson ( | isolated clusters of microbes visible |
| 3 | body appears opaque due to microbial growth inside the cuticle ( | cellular details and outline degrade in integument, Z-banding no longer visible in muscle when viewed under cross-polarized light. Small droplets of what appear to be lipid form in association with tissues | microbes visible in distal appendages. Increase in density in haemocoel | patchy growth of biofilms ( |
| 4 | shrinkage of cuticle and internal structure, loss of some distal appendages ( | no cellular details visible, gross outline of muscle tissue still visible. Lipid droplets are present in large numbers in some cases outlining where tissue previously occurred | extensive infiltration by microbes into body cavity and through tissues. Individual microbes difficult to image ( | enclosure—surface detail obscured by biofilm |
| 5 | thoracic and abdominal cuticle failure, internal contents leaks from carcass when disturbed ( | no tissue structure visible except unsupported basement membrane of gut, large spherulitic masses of lipid proteinacous fragments visible | cuticle packed with biofilm, individual microbes impossible to image by light microscopy in appendages and body segments due to high population density ( | thick biofilm of diverse morphotypes overgrows initial community, degradation of underlying cuticle surface evident ( |
| 6 | cuticular fragments and unsupported gut all that remains ( | structural failure, unsupported gut pulls away from cuticle, amorphous decay fabric released into surrounding medium | cuticle fails releasing microbes | structural failure of underlying cuticle |
Figure 1.Generalized decay sequence in Artemia (a–g) and comparison to Burgess Shale-type fossils (h–i). (a) Undecayed specimen. (b) Thoracopods become matted. (c) Body and limbs (arrow) becomes opaque due to microbial activity. (d) Cuticle shrinks; some distal podomeres are disarticulated, cloudy appearance of limbs indicates internal biofilm. (e) Cuticle fails, internal biofilm is lost. (f) Cuticle disintegrates into fragments. (g) Only the unsupported gut remains. (h) Opabinia specimen (Burgess Shale, BC, Smithsonian National Museum of Natural History Washington DC, USNM 155600) showing the gut and associated microbial fabrics. (i) Enlargement of Opabinia gut area (Burgess Shale, BC, Geological Survey of Canada GSC 40251). Dark area, g gut; gf grey features corresponding to structures interpreted as gut diverticulae or limbs, bc lighter areas, body cavity. Scale bar: (a–c,i) = 2 mm, (d–g) = 1 mm, (h) = 10 mm. (Online version in colour.)
Figure 4.Graphs of median decay stage at each recorded time interval, error bars indicate median absolute deviation per interval where value is greater than zero. (Online version in colour.)
Figure 2.Microbial activity during Artemia decay. (a) Hindgut of live Artemia. (b) Microbes (arrow) escape at midgut/hindgut boundary and migrate into haemocoel. (c) Cuticle filled with microbes forming a dense biofilm; (d) replacement of gut epithelium by microbial pseudomorph. bm, basement membrane; bf, biofilm; gc, gut contents; m, musculature surrounding gut. (e) Section of appendage filled with biofilm (reducing conditions). (f) Enlargement of (e). (g) Surface microbes at early stage decay. (h) Diverse microbial community after 28 days in closed conditions. Scale bar (a) 500 µm, (b) 250 µm, (c) 50 µm, (d) 20 µm, (e) 200 µm, (f) 10 µm, (g) 20 µm, (h) 300 µm. (Online version in colour.)
Figure 3.Count data of decay experiments, six samples coded per interval. (Online version in colour.)
Figure 5.Biofilm associated with gut and internal body cavity with phosphatic mineral spheroids growing in situ. (a) Internal body cavity biofilm. (b) Gut-associated biofilm. Arrows indicate phosphatic spheroids. (c) Point EDX spectrum from mineralized spheroid, note distinct Ca, Mg and P peaks (not present in surrounding tissue) Au peak results from gold coating used for SEM imaging. Scale bar: (a) 20 µm and (b) 30 µm. (Online version in colour.)
Figure 6.General model of decay in Artemia in open conditions.
Figure 7.Hypothesized model of decay and pathways leading to exceptional preservation.