Literature DB >> 25971551

Binary 2in1 Vectors Improve in Planta (Co)localization and Dynamic Protein Interaction Studies.

Andreas Hecker1, Niklas Wallmeroth1, Sébastien Peter1, Michael R Blatt1, Klaus Harter1, Christopher Grefen2.   

Abstract

Fluorescence-based protein-protein interaction techniques are vital tools for understanding in vivo cellular functions on a mechanistic level. However, only under the condition of highly efficient (co)transformation and accumulation can techniques such as Förster resonance energy transfer (FRET) realize their potential for providing highly accurate and quantitative interaction data. FRET as a fluorescence-based method unifies several advantages, such as measuring in an in vivo environment, real-time context, and the ability to include transient interactions as well as detecting the mere proximity of proteins. Here, we introduce a novel vector set that incorporates the benefit of the recombination-based 2in1 cloning system with the latest state-of-the-art fluorescent proteins for optimal coaccumulation and FRET output studies. We demonstrate its utility across a range of methods. Merging the 2in1 cloning system with new-generation FRET fluorophore pairs allows for enhanced detection, speeds up the preparation of clones, and enables colocalization studies and the identification of meaningful protein-protein interactions in vivo.
© 2015 American Society of Plant Biologists. All Rights Reserved.

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Year:  2015        PMID: 25971551      PMCID: PMC4741326          DOI: 10.1104/pp.15.00533

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  53 in total

1.  Systematic analysis of SNARE molecules in Arabidopsis: dissection of the post-Golgi network in plant cells.

Authors:  Tomohiro Uemura; Takashi Ueda; Ryosuke L Ohniwa; Akihiko Nakano; Kunio Takeyasu; Masa H Sato
Journal:  Cell Struct Funct       Date:  2004-04       Impact factor: 2.212

2.  Improving membrane voltage measurements using FRET with new fluorescent proteins.

Authors:  Hidekazu Tsutsui; Satoshi Karasawa; Yasushi Okamura; Atsushi Miyawaki
Journal:  Nat Methods       Date:  2008-07-11       Impact factor: 28.547

3.  T-DNA transfer and T-DNA integration efficiencies upon Arabidopsis thaliana root explant cocultivation and floral dip transformation.

Authors:  Rim Ghedira; Sylvie De Buck; Frédéric Van Ex; Geert Angenon; Ann Depicker
Journal:  Planta       Date:  2013-08-24       Impact factor: 4.116

4.  Silencing of transgenes introduced into leaves by agroinfiltration: a simple, rapid method for investigating sequence requirements for gene silencing.

Authors:  H Schöb; C Kunz; F Meins
Journal:  Mol Gen Genet       Date:  1997-11

Review 5.  Advanced fluorescence microscopy techniques--FRAP, FLIP, FLAP, FRET and FLIM.

Authors:  Hellen C Ishikawa-Ankerhold; Richard Ankerhold; Gregor P C Drummen
Journal:  Molecules       Date:  2012-04-02       Impact factor: 4.411

6.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

7.  Screening for in planta protein-protein interactions combining bimolecular fluorescence complementation with flow cytometry.

Authors:  Kenneth Wayne Berendzen; Maik Böhmer; Niklas Wallmeroth; Sébastien Peter; Marko Vesić; Ying Zhou; Franziska Katharina Elisabeth Tiesler; Frank Schleifenbaum; Klaus Harter
Journal:  Plant Methods       Date:  2012-07-12       Impact factor: 4.993

8.  Functional characterization of the KNOLLE-interacting t-SNARE AtSNAP33 and its role in plant cytokinesis.

Authors:  M Heese; X Gansel; L Sticher; P Wick; M Grebe; F Granier; G Jurgens
Journal:  J Cell Biol       Date:  2001-10-08       Impact factor: 10.539

9.  SNARE complexes of different composition jointly mediate membrane fusion in Arabidopsis cytokinesis.

Authors:  Farid El Kasmi; Cornelia Krause; Ulrike Hiller; York-Dieter Stierhof; Ulrike Mayer; Laura Conner; Lingtian Kong; Ilka Reichardt; Anton A Sanderfoot; Gerd Jürgens
Journal:  Mol Biol Cell       Date:  2013-03-20       Impact factor: 4.138

10.  SDM-Assist software to design site-directed mutagenesis primers introducing "silent" restriction sites.

Authors:  Abhijit Karnik; Rucha Karnik; Christopher Grefen
Journal:  BMC Bioinformatics       Date:  2013-03-22       Impact factor: 3.169

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  37 in total

1.  Tri-SUS: a yeast split-ubiquitin assay to examine protein interactions governed by a third binding partner.

Authors:  Ben Zhang; Lingfeng Xia; Yaxian Zhang; Hui Wang; Rucha Karnik
Journal:  Plant Physiol       Date:  2021-03-15       Impact factor: 8.340

2.  Unusual Roles of Secretory SNARE SYP132 in Plasma Membrane H+-ATPase Traffic and Vegetative Plant Growth.

Authors:  Lingfeng Xia; Maria Mar Marquès-Bueno; Craig Graham Bruce; Rucha Karnik
Journal:  Plant Physiol       Date:  2019-03-29       Impact factor: 8.340

3.  In Planta Single-Molecule Pull-Down Reveals Tetrameric Stoichiometry of HD-ZIPIII:LITTLE ZIPPER Complexes.

Authors:  Aman Y Husbands; Vasudha Aggarwal; Taekjip Ha; Marja C P Timmermans
Journal:  Plant Cell       Date:  2016-07-06       Impact factor: 11.277

Review 4.  Techniques for the Analysis of Protein-Protein Interactions in Vivo.

Authors:  Shuping Xing; Niklas Wallmeroth; Kenneth W Berendzen; Christopher Grefen
Journal:  Plant Physiol       Date:  2016-04-25       Impact factor: 8.340

5.  Loss of GET pathway orthologs in Arabidopsis thaliana causes root hair growth defects and affects SNARE abundance.

Authors:  Shuping Xing; Dietmar Gerald Mehlhorn; Niklas Wallmeroth; Lisa Yasmin Asseck; Ritwika Kar; Alessa Voss; Philipp Denninger; Vanessa Aphaia Fiona Schmidt; Markus Schwarzländer; York-Dieter Stierhof; Guido Grossmann; Christopher Grefen
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

6.  Dual Sites for SEC11 on the SNARE SYP121 Implicate a Binding Exchange during Secretory Traffic.

Authors:  Ben Zhang; Rucha Karnik; Jonas Alvim; Naomi Donald; Michael R Blatt
Journal:  Plant Physiol       Date:  2019-03-08       Impact factor: 8.340

7.  Brassinosteroid and Hydrogen Peroxide Interdependently Induce Stomatal Opening by Promoting Guard Cell Starch Degradation.

Authors:  Jin-Ge Li; Min Fan; Wenbo Hua; Yanchen Tian; Lian-Ge Chen; Yu Sun; Ming-Yi Bai
Journal:  Plant Cell       Date:  2020-02-12       Impact factor: 11.277

8.  An EDS1-SAG101 Complex Is Essential for TNL-Mediated Immunity in Nicotiana benthamiana.

Authors:  Johannes Gantner; Jana Ordon; Carola Kretschmer; Raphaël Guerois; Johannes Stuttmann
Journal:  Plant Cell       Date:  2019-07-02       Impact factor: 11.277

9.  Supergene evolution via stepwise duplications and neofunctionalization of a floral-organ identity gene.

Authors:  Cuong Nguyen Huu; Barbara Keller; Elena Conti; Christian Kappel; Michael Lenhard
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-31       Impact factor: 11.205

10.  COLORFUL-Circuit: A Platform for Rapid Multigene Assembly, Delivery, and Expression in Plants.

Authors:  Hassan Ghareeb; Sabine Laukamm; Volker Lipka
Journal:  Front Plant Sci       Date:  2016-03-01       Impact factor: 5.753

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