Literature DB >> 25971256

Efficient and Inducible Use of Artificial MicroRNAs in Marchantia polymorpha.

Eduardo Flores-Sandoval1, Tom Dierschke1, Tom J Fisher1, John L Bowman2.   

Abstract

We describe the efficient use of artificial microRNAs (amiRs) in Marchantia polymorpha using both endogenous and heterologous primary microRNA (pri-miR) hairpin backbones. Targeting of two transcription factor genes, MpARF1 and MpRR-B, mediating different hormonal responses, demonstrated that amiRs can create specific and reproducible physiological and morphological defects, facilitating interpretation of gene function. A third amiR was designed to target a gene encoding a component of the Polycomb recessive complex 2, MpE(z), and constitutive expression of this amiR results in sporeling lethality. Adaptation of an estrogen-inducible system allowed analysis of the phenotypic effects of induction of this amiR during other stages of the life cycle. We discuss the advantages and challenges of the use of amiRs as a tool for reverse genetic analysis in M. polymorpha.
© The Author 2015. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  AUXIN RESPONSE FACTOR; Artificial microRNA; ENHANCER OF ZESTE; Marchantia; MicroRNA; RESPONSE REGULATOR; Reverse genetics

Mesh:

Substances:

Year:  2015        PMID: 25971256     DOI: 10.1093/pcp/pcv068

Source DB:  PubMed          Journal:  Plant Cell Physiol        ISSN: 0032-0781            Impact factor:   4.927


  24 in total

1.  Auxin Produced by the Indole-3-Pyruvic Acid Pathway Regulates Development and Gemmae Dormancy in the Liverwort Marchantia polymorpha.

Authors:  D Magnus Eklund; Kimitsune Ishizaki; Eduardo Flores-Sandoval; Saya Kikuchi; Yumiko Takebayashi; Shigeyuki Tsukamoto; Yuki Hirakawa; Maiko Nonomura; Hirotaka Kato; Masaru Kouno; Rishikesh P Bhalerao; Ulf Lagercrantz; Hiroyuki Kasahara; Takayuki Kohchi; John L Bowman
Journal:  Plant Cell       Date:  2015-06-02       Impact factor: 11.277

2.  Cytokinin signaling coordinates development of diverse organs in Marchantia polymorpha.

Authors:  Shiori S Aki; Ryuichi Nishihama; Takayuki Kohchi; Masaaki Umeda
Journal:  Plant Signal Behav       Date:  2019-09-18

Review 3.  Plant science's next top models.

Authors:  Igor Cesarino; Raffaele Dello Ioio; Gwendolyn K Kirschner; Michael S Ogden; Kelsey L Picard; Madlen I Rast-Somssich; Marc Somssich
Journal:  Ann Bot       Date:  2020-06-19       Impact factor: 4.357

Review 4.  Charting the genomic landscape of seed-free plants.

Authors:  Péter Szövényi; Andika Gunadi; Fay-Wei Li
Journal:  Nat Plants       Date:  2021-04-05       Impact factor: 15.793

Review 5.  The regulatory activities of microRNAs in non-vascular plants: a mini review.

Authors:  Sujay Paul; Luis Alberto Bravo Vázquez; Marilyn Márquez Nafarrate; Ana Isabel Gutiérrez Reséndiz; Aashish Srivastava; Ashutosh Sharma
Journal:  Planta       Date:  2021-08-23       Impact factor: 4.116

6.  PIF-independent regulation of growth by an evening complex in the liverwort Marchantia polymorpha.

Authors:  Ulf Lagercrantz; Anja Billhardt; Sabine N Rousku; Katarina Landberg; Mattias Thelander; D Magnus Eklund
Journal:  PLoS One       Date:  2022-06-16       Impact factor: 3.752

7.  Phytochrome Signaling Is Mediated by PHYTOCHROME INTERACTING FACTOR in the Liverwort Marchantia polymorpha.

Authors:  Keisuke Inoue; Ryuichi Nishihama; Hideo Kataoka; Masashi Hosaka; Ryo Manabe; Mika Nomoto; Yasuomi Tada; Kimitsune Ishizaki; Takayuki Kohchi
Journal:  Plant Cell       Date:  2016-06-01       Impact factor: 11.277

8.  Identification of miRNAs and Their Targets in the Liverwort Marchantia polymorpha by Integrating RNA-Seq and Degradome Analyses.

Authors:  Pin-Chun Lin; Chia-Wei Lu; Bing-Nan Shen; Guan-Zong Lee; John L Bowman; Mario A Arteaga-Vazquez; Li-Yu Daisy Liu; Syuan-Fei Hong; Chu-Fang Lo; Gong-Min Su; Takayuki Kohchi; Kimitsune Ishizaki; Sabine Zachgo; Felix Althoff; Mizuki Takenaka; Katsuyuki T Yamato; Shih-Shun Lin
Journal:  Plant Cell Physiol       Date:  2016-02-09       Impact factor: 4.927

9.  A Simple Auxin Transcriptional Response System Regulates Multiple Morphogenetic Processes in the Liverwort Marchantia polymorpha.

Authors:  Eduardo Flores-Sandoval; D Magnus Eklund; John L Bowman
Journal:  PLoS Genet       Date:  2015-05-28       Impact factor: 5.917

10.  Development of Gateway Binary Vector Series with Four Different Selection Markers for the Liverwort Marchantia polymorpha.

Authors:  Kimitsune Ishizaki; Ryuichi Nishihama; Minoru Ueda; Keisuke Inoue; Sakiko Ishida; Yoshiki Nishimura; Toshiharu Shikanai; Takayuki Kohchi
Journal:  PLoS One       Date:  2015-09-25       Impact factor: 3.240

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