Literature DB >> 25968887

KRAS Genomic Status Predicts the Sensitivity of Ovarian Cancer Cells to Decitabine.

Michelle L Stewart1, Pablo Tamayo1, Andrew J Wilson2, Stephanie Wang1, Yun Min Chang1, Jong W Kim1, Dineo Khabele2, Alykhan F Shamji1, Stuart L Schreiber3.   

Abstract

Decitabine, a cancer therapeutic that inhibits DNA methylation, produces variable antitumor response rates in patients with solid tumors that might be leveraged clinically with identification of a predictive biomarker. In this study, we profiled the response of human ovarian, melanoma, and breast cancer cells treated with decitabine, finding that RAS/MEK/ERK pathway activation and DNMT1 expression correlated with cytotoxic activity. Further, we showed that KRAS genomic status predicted decitabine sensitivity in low-grade and high-grade serous ovarian cancer cells. Pretreatment with decitabine decreased the cytotoxic activity of MEK inhibitors in KRAS-mutant ovarian cancer cells, with reciprocal downregulation of DNMT1 and MEK/ERK phosphorylation. In parallel with these responses, decitabine also upregulated the proapoptotic BCL-2 family member BNIP3, which is known to be regulated by MEK and ERK, and heightened the activity of proapoptotic small-molecule navitoclax, a BCL-2 family inhibitor. In a xenograft model of KRAS-mutant ovarian cancer, combining decitabine and navitoclax heightened antitumor activity beyond administration of either compound alone. Our results define the RAS/MEK/DNMT1 pathway as a determinant of sensitivity to DNA methyltransferase inhibition, specifically implicating KRAS status as a biomarker of drug response in ovarian cancer. ©2015 American Association for Cancer Research.

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Year:  2015        PMID: 25968887      PMCID: PMC4506246          DOI: 10.1158/0008-5472.CAN-14-2860

Source DB:  PubMed          Journal:  Cancer Res        ISSN: 0008-5472            Impact factor:   12.701


  33 in total

1.  Phase I study of decitabine in combination with vorinostat in patients with advanced solid tumors and non-Hodgkin's lymphomas.

Authors:  Anastasios Stathis; Sebastien J Hotte; Eric X Chen; Holger W Hirte; Amit M Oza; Patricia Moretto; Sheila Webster; Anne Laughlin; Lee-Anne Stayner; Shauna McGill; Lisa Wang; Wen-jiang Zhang; Igor Espinoza-Delgado; Julianne L Holleran; Merrill J Egorin; Lillian L Siu
Journal:  Clin Cancer Res       Date:  2011-01-28       Impact factor: 12.531

2.  Molecular signatures database (MSigDB) 3.0.

Authors:  Arthur Liberzon; Aravind Subramanian; Reid Pinchback; Helga Thorvaldsdóttir; Pablo Tamayo; Jill P Mesirov
Journal:  Bioinformatics       Date:  2011-05-05       Impact factor: 6.937

3.  p53 independent epigenetic-differentiation treatment in xenotransplant models of acute myeloid leukemia.

Authors:  K P Ng; Q Ebrahem; S Negrotto; R Z Mahfouz; K A Link; Z Hu; X Gu; A Advani; M Kalaycio; R Sobecks; M Sekeres; E Copelan; T Radivoyevitch; J Maciejewski; J C Mulloy; Y Saunthararajah
Journal:  Leukemia       Date:  2011-06-24       Impact factor: 11.528

4.  Silencing of BNIP3 results from promoter methylation by DNA methyltransferase 1 induced by the mitogen-activated protein kinase pathway.

Authors:  Hyun-Jung An; Hayyoung Lee; Sang-Gi Paik
Journal:  Mol Cells       Date:  2011-05-11       Impact factor: 5.034

5.  H-ras up-regulates expression of BNIP3.

Authors:  Wojciech Kalas; Ewelina Swiderek; Andrzej Rapak; Magdalena Kopij; Janusz Rak; Leon Strzadala
Journal:  Anticancer Res       Date:  2011-09       Impact factor: 2.480

6.  A chemical probe selectively inhibits G9a and GLP methyltransferase activity in cells.

Authors:  Masoud Vedadi; Dalia Barsyte-Lovejoy; Feng Liu; Sylvie Rival-Gervier; Abdellah Allali-Hassani; Viviane Labrie; Tim J Wigle; Peter A Dimaggio; Gregory A Wasney; Alena Siarheyeva; Aiping Dong; Wolfram Tempel; Sun-Chong Wang; Xin Chen; Irene Chau; Thomas J Mangano; Xi-Ping Huang; Catherine D Simpson; Samantha G Pattenden; Jacqueline L Norris; Dmitri B Kireev; Ashutosh Tripathy; Aled Edwards; Bryan L Roth; William P Janzen; Benjamin A Garcia; Arturas Petronis; James Ellis; Peter J Brown; Stephen V Frye; Cheryl H Arrowsmith; Jian Jin
Journal:  Nat Chem Biol       Date:  2011-07-10       Impact factor: 15.040

Review 7.  Will DNA methylation inhibitors work in solid tumors? A review of the clinical experience with azacitidine and decitabine in solid tumors.

Authors:  Lisa A Cowan; Sundeep Talwar; Allen S Yang
Journal:  Epigenomics       Date:  2010-02       Impact factor: 4.778

Review 8.  Epigenetic therapies for chemoresensitization of epithelial ovarian cancer.

Authors:  Daniela E Matei; Kenneth P Nephew
Journal:  Gynecol Oncol       Date:  2009-10-24       Impact factor: 5.482

9.  Systematic identification of genomic markers of drug sensitivity in cancer cells.

Authors:  Mathew J Garnett; Elena J Edelman; Sonja J Heidorn; Chris D Greenman; Anahita Dastur; King Wai Lau; Patricia Greninger; I Richard Thompson; Xi Luo; Jorge Soares; Qingsong Liu; Francesco Iorio; Didier Surdez; Li Chen; Randy J Milano; Graham R Bignell; Ah T Tam; Helen Davies; Jesse A Stevenson; Syd Barthorpe; Stephen R Lutz; Fiona Kogera; Karl Lawrence; Anne McLaren-Douglas; Xeni Mitropoulos; Tatiana Mironenko; Helen Thi; Laura Richardson; Wenjun Zhou; Frances Jewitt; Tinghu Zhang; Patrick O'Brien; Jessica L Boisvert; Stacey Price; Wooyoung Hur; Wanjuan Yang; Xianming Deng; Adam Butler; Hwan Geun Choi; Jae Won Chang; Jose Baselga; Ivan Stamenkovic; Jeffrey A Engelman; Sreenath V Sharma; Olivier Delattre; Julio Saez-Rodriguez; Nathanael S Gray; Jeffrey Settleman; P Andrew Futreal; Daniel A Haber; Michael R Stratton; Sridhar Ramaswamy; Ultan McDermott; Cyril H Benes
Journal:  Nature       Date:  2012-03-28       Impact factor: 49.962

10.  Oncogenic RAS directs silencing of tumor suppressor genes through ordered recruitment of transcriptional repressors.

Authors:  Narendra Wajapeyee; Sunil K Malonia; Rajendra K Palakurthy; Michael R Green
Journal:  Genes Dev       Date:  2013-10-08       Impact factor: 11.361

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  10 in total

1.  Computational Analyses Connect Small-Molecule Sensitivity to Cellular Features Using Large Panels of Cancer Cell Lines.

Authors:  Matthew G Rees; Brinton Seashore-Ludlow; Paul A Clemons
Journal:  Methods Mol Biol       Date:  2019

2.  DNA methyltransferase expression in triple-negative breast cancer predicts sensitivity to decitabine.

Authors:  Jia Yu; Bo Qin; Ann M Moyer; Somaira Nowsheen; Tongzheng Liu; Sisi Qin; Yongxian Zhuang; Duan Liu; Shijia W Lu; Krishna R Kalari; Daniel W Visscher; John A Copland; Sarah A McLaughlin; Alvaro Moreno-Aspitia; Donald W Northfelt; Richard J Gray; Zhenkun Lou; Vera J Suman; Richard Weinshilboum; Judy C Boughey; Matthew P Goetz; Liewei Wang
Journal:  J Clin Invest       Date:  2018-04-30       Impact factor: 14.808

3.  LINC00162 confers sensitivity to 5-Aza-2'-deoxycytidine via modulation of an RNA splicing protein, HNRNPH1.

Authors:  Liang Zong; Naoko Hattori; Yoshimi Yasukawa; Kana Kimura; Akiko Mori; Yasuyuki Seto; Toshikazu Ushijima
Journal:  Oncogene       Date:  2019-03-26       Impact factor: 9.867

4.  KITlow Cells Mediate Imatinib Resistance in Gastrointestinal Stromal Tumor.

Authors:  Sudeep Banerjee; Hyunho Yoon; Stephanie Ting; Chih-Min Tang; Mayra Yebra; Alexander T Wenzel; Huwate Yeerna; Jill P Mesirov; Robert J Wechsler-Reya; Pablo Tamayo; Jason K Sicklick
Journal:  Mol Cancer Ther       Date:  2021-08-10       Impact factor: 6.261

Review 5.  DNA methyltransferase inhibitors combination therapy for the treatment of solid tumor: mechanism and clinical application.

Authors:  Chunhong Hu; Xiaohan Liu; Yue Zeng; Junqi Liu; Fang Wu
Journal:  Clin Epigenetics       Date:  2021-08-27       Impact factor: 6.551

Review 6.  DNA methyltransferase-1 in acute myeloid leukaemia: beyond the maintenance of DNA methylation.

Authors:  Mengyuan Li; Donghua Zhang
Journal:  Ann Med       Date:  2022-12       Impact factor: 5.348

7.  Screening drug effects in patient-derived cancer cells links organoid responses to genome alterations.

Authors:  Julia Jabs; Franziska M Zickgraf; Jeongbin Park; Steve Wagner; Xiaoqi Jiang; Katharina Jechow; Kortine Kleinheinz; Umut H Toprak; Marc A Schneider; Michael Meister; Saskia Spaich; Marc Sütterlin; Matthias Schlesner; Andreas Trumpp; Martin Sprick; Roland Eils; Christian Conrad
Journal:  Mol Syst Biol       Date:  2017-11-27       Impact factor: 11.429

8.  Double-stranded RNA induction asa potential dynamic biomarkerfor DNA-demethylating agents.

Authors:  Minjeong Kang; Raisa Kharbash; Ja Min Byun; Jaemin Jeon; Ahsan Ausaf Ali; Doyeong Ku; Jimin Yoon; Yongsuk Ku; Jooyeon Sohn; Seung-Jae V Lee; Dong-Yeop Shin; Youngil Koh; Sung-Soo Yoon; Junshik Hong; Yoosik Kim
Journal:  Mol Ther Nucleic Acids       Date:  2022-07-21       Impact factor: 10.183

9.  The landscape of chromosomal aberrations in breast cancer mouse models reveals driver-specific routes to tumorigenesis.

Authors:  Uri Ben-David; Gavin Ha; Prasidda Khadka; Xin Jin; Bang Wong; Lude Franke; Todd R Golub
Journal:  Nat Commun       Date:  2016-07-04       Impact factor: 14.919

10.  Modulation of the Endothelin System in Colorectal Cancer Liver Metastasis: Influence of Epigenetic Mechanisms?

Authors:  Mohamed R Mahdi; Rania B Georges; Doaa M Ali; Raouf F Bedeer; Huda M Eltahry; Abd-El Hakiem Z Gabr; Martin R Berger
Journal:  Front Pharmacol       Date:  2020-03-03       Impact factor: 5.810

  10 in total

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