Literature DB >> 25966381

Independent components analysis to increase efficiency of discriminant analysis methods (FDA and LDA): Application to NMR fingerprinting of wine.

Yulia B Monakhova1, Rolf Godelmann2, Thomas Kuballa2, Svetlana P Mushtakova3, Douglas N Rutledge4.   

Abstract

Discriminant analysis (DA) methods, such as linear discriminant analysis (LDA) or factorial discriminant analysis (FDA), are well-known chemometric approaches for solving classification problems in chemistry. In most applications, principle components analysis (PCA) is used as the first step to generate orthogonal eigenvectors and the corresponding sample scores are utilized to generate discriminant features for the discrimination. Independent components analysis (ICA) based on the minimization of mutual information can be used as an alternative to PCA as a preprocessing tool for LDA and FDA classification. To illustrate the performance of this ICA/DA methodology, four representative nuclear magnetic resonance (NMR) data sets of wine samples were used. The classification was performed regarding grape variety, year of vintage and geographical origin. The average increase for ICA/DA in comparison with PCA/DA in the percentage of correct classification varied between 6±1% and 8±2%. The maximum increase in classification efficiency of 11±2% was observed for discrimination of the year of vintage (ICA/FDA) and geographical origin (ICA/LDA). The procedure to determine the number of extracted features (PCs, ICs) for the optimum DA models was discussed. The use of independent components (ICs) instead of principle components (PCs) resulted in improved classification performance of DA methods. The ICA/LDA method is preferable to ICA/FDA for recognition tasks based on NMR spectroscopic measurements.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  (1)H NMR spectroscopy; Discriminant analysis; Independent component analysis; Principle component analysis; Wine

Year:  2015        PMID: 25966381     DOI: 10.1016/j.talanta.2015.03.037

Source DB:  PubMed          Journal:  Talanta        ISSN: 0039-9140            Impact factor:   6.057


  4 in total

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Journal:  J Inherit Metab Dis       Date:  2017-08-25       Impact factor: 4.982

2.  A New Optical Sensor Based on Laser Speckle and Chemometrics for Precision Agriculture: Application to Sunflower Plant-Breeding.

Authors:  Maxime Ryckewaert; Daphné Héran; Emma Faur; Pierre George; Bruno Grèzes-Besset; Frédéric Chazallet; Yannick Abautret; Myriam Zerrad; Claude Amra; Ryad Bendoula
Journal:  Sensors (Basel)       Date:  2020-08-18       Impact factor: 3.576

3.  Comparative NMR Metabolomics Profiling between Mexican Ancestral & Artisanal Mezcals and Industrialized Wines to Discriminate Geographical Origins, Agave Species or Grape Varieties and Manufacturing Processes as a Function of Their Quality Attributes.

Authors:  Rosa López-Aguilar; Holber Zuleta-Prada; Arturo Hernández-Montes; José Enrique Herbert-Pucheta
Journal:  Foods       Date:  2021-01-13

Review 4.  Operationalizing the Exposome Using Passive Silicone Samplers.

Authors:  Zoe Coates Fuentes; Yuri Levin Schwartz; Anna R Robuck; Douglas I Walker
Journal:  Curr Pollut Rep       Date:  2022-01-04
  4 in total

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