Literature DB >> 25961413

Structural analysis of multicellular organisms with cryo-electron tomography.

Jan Harapin1, Mandy Börmel2, K Tanuj Sapra1, Damian Brunner3, Andres Kaech4, Ohad Medalia5.   

Abstract

We developed a method for visualizing tissues from multicellular organisms using cryo-electron tomography. Our protocol involves vitrifying samples with high-pressure freezing, thinning them with cryo-FIB-SEM (focused-ion-beam scanning electron microscopy) and applying fiducial gold markers under cryogenic conditions to the lamellae post-milling. We applied this protocol to acquire tomograms of vitrified Caenorhabditis elegans embryos and worms, which showed the intracellular organization of selected tissues at particular developmental stages in otherwise intact specimens.

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Mesh:

Year:  2015        PMID: 25961413     DOI: 10.1038/nmeth.3401

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  23 in total

Review 1.  The structure of lamin filaments in somatic cells as revealed by cryo-electron tomography.

Authors:  Y Turgay; O Medalia
Journal:  Nucleus       Date:  2017-06-21       Impact factor: 4.197

Review 2.  Focused ion beams in biology.

Authors:  Kedar Narayan; Sriram Subramaniam
Journal:  Nat Methods       Date:  2015-11       Impact factor: 28.547

3.  Preparing samples from whole cells using focused-ion-beam milling for cryo-electron tomography.

Authors:  Felix R Wagner; Reika Watanabe; Ruud Schampers; Digvijay Singh; Hans Persoon; Miroslava Schaffer; Peter Fruhstorfer; Jürgen Plitzko; Elizabeth Villa
Journal:  Nat Protoc       Date:  2020-05-13       Impact factor: 13.491

4.  The molecular architecture of lamins in somatic cells.

Authors:  Yagmur Turgay; Matthias Eibauer; Anne E Goldman; Takeshi Shimi; Maayan Khayat; Kfir Ben-Harush; Anna Dubrovsky-Gaupp; K Tanuj Sapra; Robert D Goldman; Ohad Medalia
Journal:  Nature       Date:  2017-03-01       Impact factor: 49.962

5.  In situ structure of intestinal apical surface reveals nanobristles on microvilli.

Authors:  Hao Zhu; Meijing Li; Ruixue Zhao; Ming Li; Yongping Chai; Zhiwen Zhu; Yihong Yang; Wei Li; Zhongyun Xie; Xiaomin Li; Kexin Lei; Xueming Li; Guangshuo Ou
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-06       Impact factor: 12.779

Review 6.  Molecular mechanisms of amyloid formation in living systems.

Authors:  Tessa Sinnige
Journal:  Chem Sci       Date:  2022-05-17       Impact factor: 9.969

7.  A lamin A/C variant causing striated muscle disease provides insights into filament organization.

Authors:  Rafael Kronenberg-Tenga; Meltem Tatli; Matthias Eibauer; Wei Wu; Ji-Yeon Shin; Gisèle Bonne; Howard J Worman; Ohad Medalia
Journal:  J Cell Sci       Date:  2021-03-22       Impact factor: 5.285

Review 8.  Label-free visual proteomics: Coupling MS- and EM-based approaches in structural biology.

Authors:  Oleg Klykov; Mykhailo Kopylov; Bridget Carragher; Albert J R Heck; Alex J Noble; Richard A Scheltema
Journal:  Mol Cell       Date:  2022-01-20       Impact factor: 17.970

9.  Practical Approaches for Cryo-FIB Milling and Applications for Cellular Cryo-Electron Tomography.

Authors:  Vinson Lam; Elizabeth Villa
Journal:  Methods Mol Biol       Date:  2021

Review 10.  Coming of Age: Cryo-Electron Tomography as a Versatile Tool to Generate High-Resolution Structures at Cellular/Biological Interfaces.

Authors:  Zuoneng Wang; Qingyang Zhang; Carsten Mim
Journal:  Int J Mol Sci       Date:  2021-06-08       Impact factor: 5.923

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