Literature DB >> 25957774

A toolbox for miRNA analysis.

Petr Svoboda1.   

Abstract

MicroRNAs (miRNAs) are small regulatory RNAs, which mediate selective repression of gene expression. miRNAs play important roles in many natural and pathological processes. Numerous tools were developed for their detection and functional analysis. There are many excellent articles covering different areas of miRNA biology in detail. At the same time, I think there are many colleagues who face a miRNA-related research problem and would appreciate having an introductory general overview of tools for miRNA analysis, which would help them in considering available options. Accordingly, this review provides an elementary roadmap to navigate among available tools for miRNA analysis. The most common problems and errors observed in miRNA research are also discussed.
Copyright © 2015 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

Keywords:  Antagomir; Inhibition; Locked nucleic acids; MicroRNA; Reporter

Mesh:

Substances:

Year:  2015        PMID: 25957774     DOI: 10.1016/j.febslet.2015.04.054

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  16 in total

Review 1.  Interplay of mitochondrial metabolism and microRNAs.

Authors:  Julian Geiger; Louise T Dalgaard
Journal:  Cell Mol Life Sci       Date:  2016-08-25       Impact factor: 9.261

2.  Two-tailed RT-qPCR: a novel method for highly accurate miRNA quantification.

Authors:  Peter Androvic; Lukas Valihrach; Julie Elling; Robert Sjoback; Mikael Kubista
Journal:  Nucleic Acids Res       Date:  2017-09-06       Impact factor: 16.971

Review 3.  miRNAs in B Cell Development and Lymphomagenesis.

Authors:  Maryaline Coffre; Sergei B Koralov
Journal:  Trends Mol Med       Date:  2017-07-07       Impact factor: 11.951

4.  Cell-Based Reporter System for High-Throughput Screening of MicroRNA Pathway Inhibitors and Its Limitations.

Authors:  Katerina Brustikova; David Sedlak; Jana Kubikova; Ctibor Skuta; Katerina Solcova; Radek Malik; Petr Bartunek; Petr Svoboda
Journal:  Front Genet       Date:  2018-02-27       Impact factor: 4.599

5.  MicroRNA‑126 inhibits endothelial permeability and apoptosis in apolipoprotein E‑knockout mice fed a high‑fat diet.

Authors:  Xiao-Wen Cheng; Yu-Feng Wan; Qing Zhou; Yuan Wang; Hua-Qing Zhu
Journal:  Mol Med Rep       Date:  2017-07-12       Impact factor: 2.952

6.  miR-23a-3p is a Key Regulator of IL-17C-Induced Tumor Angiogenesis in Colorectal Cancer.

Authors:  Yunna Lee; Su Jin Kim; Jieun Choo; Gwangbeom Heo; Jin-Wook Yoo; Yunjin Jung; Sang Hoon Rhee; Eunok Im
Journal:  Cells       Date:  2020-06-01       Impact factor: 6.600

7.  Replication Study: The microRNA miR-34a inhibits prostate cancer stem cells and metastasis by directly repressing CD44.

Authors:  Xuefei Yan; Beibei Tang; Biao Chen; Yongli Shan; Huajun Yang; Elizabeth Iorns; Rachel Tsui; Alexandria Denis; Nicole Perfito; Timothy M Errington
Journal:  Elife       Date:  2019-03-12       Impact factor: 8.140

8.  MiR-367 negatively regulates apoptosis induced by adriamycin in osteosarcoma cells by targeting KLF4.

Authors:  Guang-Chao Wang; Qian-Yun He; Da-Ke Tong; Chuan-Feng Wang; Kang Liu; Chen Ding; Fang Ji; Hao Zhang
Journal:  J Bone Oncol       Date:  2016-02-17       Impact factor: 4.072

9.  The Non-Specific Binding of Fluorescent-Labeled MiRNAs on Cell Surface by Hydrophobic Interaction.

Authors:  Ting Lu; Zongwei Lin; Jianwei Ren; Peng Yao; Xiaowei Wang; Zhe Wang; Qunye Zhang
Journal:  PLoS One       Date:  2016-03-01       Impact factor: 3.240

10.  miR-129-5p Inhibits Adipogenesis through Autophagy and May Be a Potential Biomarker for Obesity.

Authors:  Xue Fu; Lina Jin; Luyu Han; Yini Yuan; Qian Mu; Hui Wang; Jian Yang; Guang Ning; Donglei Zhou; Zhiguo Zhang
Journal:  Int J Endocrinol       Date:  2019-11-06       Impact factor: 3.257

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