Literature DB >> 25951292

Miniature microscopes for large-scale imaging of neuronal activity in freely behaving rodents.

Yaniv Ziv1, Kunal K Ghosh2.   

Abstract

Recording neuronal activity in behaving subjects has been instrumental in studying how information is represented and processed by the brain. Recent advances in optical imaging and bioengineering have converged to enable time-lapse, cell-type specific recordings of neuronal activities from large neuronal populations in deep-brain structures of freely behaving rodents. We will highlight these advancements, with an emphasis on miniaturized integrated microscopy for large-scale imaging in freely behaving mice. This technology potentially enables studies that were difficult to perform using previous generation imaging and current electrophysiological techniques. These studies include longitudinal and population-level analyses of neuronal representations associated with different types of naturalistic behaviors and cognitive or emotional processes.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 25951292     DOI: 10.1016/j.conb.2015.04.001

Source DB:  PubMed          Journal:  Curr Opin Neurobiol        ISSN: 0959-4388            Impact factor:   6.627


  27 in total

Review 1.  Contemporary approaches to neural circuit manipulation and mapping: focus on reward and addiction.

Authors:  Benjamin T Saunders; Jocelyn M Richard; Patricia H Janak
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-09-19       Impact factor: 6.237

2.  Visualization of cortical, subcortical and deep brain neural circuit dynamics during naturalistic mammalian behavior with head-mounted microscopes and chronically implanted lenses.

Authors:  Shanna L Resendez; Josh H Jennings; Randall L Ung; Vijay Mohan K Namboodiri; Zhe Charles Zhou; James M Otis; Hiroshi Nomura; Jenna A McHenry; Oksana Kosyk; Garret D Stuber
Journal:  Nat Protoc       Date:  2016-02-25       Impact factor: 13.491

3.  BSSE: An open-source image processing tool for miniaturized microscopy.

Authors:  Jeonghwan Son; Biagio Mandracchia; Michael D Caponegro; Stella E Tsirka; Shu Jia
Journal:  Opt Express       Date:  2019-06-24       Impact factor: 3.894

4.  Multimodal Functional Analysis Platform: 1. Ultrathin Fluorescence Endoscope Imaging System Enables Flexible Functional Brain Imaging.

Authors:  Makoto Osanai; Hideki Miwa; Atsushi Tamura; Satomi Kikuta; Yoshio Iguchi; Yuchio Yanagawa; Kazuto Kobayashi; Norihiro Katayama; Tetsu Tanaka; Hajime Mushiake
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

Review 5.  The Insula: An Underestimated Brain Area in Clinical Neuroscience, Psychiatry, and Neurology.

Authors:  Ho Namkung; Sun-Hong Kim; Akira Sawa
Journal:  Trends Neurosci       Date:  2017-03-15       Impact factor: 13.837

6.  Efficient and accurate extraction of in vivo calcium signals from microendoscopic video data.

Authors:  Shanna L Resendez; Jose Rodriguez-Romaguera; Jessica C Jimenez; Shay Q Neufeld; Pengcheng Zhou; Andrea Giovannucci; Johannes Friedrich; Eftychios A Pnevmatikakis; Garret D Stuber; Rene Hen; Mazen A Kheirbek; Bernardo L Sabatini; Robert E Kass; Liam Paninski
Journal:  Elife       Date:  2018-02-22       Impact factor: 8.140

7.  Imaging Cortical Dynamics in GCaMP Transgenic Rats with a Head-Mounted Widefield Macroscope.

Authors:  Benjamin B Scott; Stephan Y Thiberge; Caiying Guo; D Gowanlock R Tervo; Carlos D Brody; Alla Y Karpova; David W Tank
Journal:  Neuron       Date:  2018-10-25       Impact factor: 17.173

Review 8.  Application of optogenetics and in vivo imaging approaches for elucidating the neurobiology of addiction.

Authors:  Casey R Vickstrom; Shana Terai Snarrenberg; Vladislav Friedman; Qing-Song Liu
Journal:  Mol Psychiatry       Date:  2021-06-18       Impact factor: 13.437

Review 9.  Variance and invariance of neuronal long-term representations.

Authors:  Claudia Clopath; Tobias Bonhoeffer; Mark Hübener; Tobias Rose
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-03-05       Impact factor: 6.237

10.  Tracking the Same Neurons across Multiple Days in Ca2+ Imaging Data.

Authors:  Liron Sheintuch; Alon Rubin; Noa Brande-Eilat; Nitzan Geva; Noa Sadeh; Or Pinchasof; Yaniv Ziv
Journal:  Cell Rep       Date:  2017-10-24       Impact factor: 9.423

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