Literature DB >> 2594763

A tissue-specific change in repetitive DNA in rats.

H Yokota1, T Iwasaki, M Takahashi, M Oishi.   

Abstract

From a genomic library constructed from an EcoRI digest of Wistar rat brain DNA, we isolated a clone (BL-1) that gave a 0.6-kilobase restriction fragment only in brain (or lens) DNA upon Southern hybridization. The tissue-specific fragment was present in Wistar and other strains (Sprague-Dawley and Donryu) of rats regardless of their sex and age. Sequencing of the clone indicated that it is closely related to a part of the LINE 3 sequence, one of the highly repetitive sequences present throughout mammalian genomes. Polymerase chain reaction using primer sequences in the BL-1 clone indicated that it is derived from an amplified (rear-ranged) sequence, although other explanations are possible. These results suggest that there are tissue-specific changes in DNA primary structure during mammalian developmental processes.

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Year:  1989        PMID: 2594763      PMCID: PMC298468          DOI: 10.1073/pnas.86.23.9233

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

2.  L1 family of repetitive DNA sequences in primates may be derived from a sequence encoding a reverse transcriptase-related protein.

Authors:  M Hattori; S Kuhara; O Takenaka; Y Sakaki
Journal:  Nature       Date:  1986 Jun 5-11       Impact factor: 49.962

3.  Metaphase chromosome anomaly: association with drug resistance and cell-specific products.

Authors:  J L Biedler; B A Spengler
Journal:  Science       Date:  1976-01-16       Impact factor: 47.728

4.  Quantification of polymerase chain reaction products by affinity-based hybrid collection.

Authors:  A C Syvänen; M Bengtström; J Tenhunen; H Söderlund
Journal:  Nucleic Acids Res       Date:  1988-12-09       Impact factor: 16.971

5.  Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia.

Authors:  R K Saiki; S Scharf; F Faloona; K B Mullis; G T Horn; H A Erlich; N Arnheim
Journal:  Science       Date:  1985-12-20       Impact factor: 47.728

6.  The sequence of a large L1Md element reveals a tandemly repeated 5' end and several features found in retrotransposons.

Authors:  D D Loeb; R W Padgett; S C Hardies; W R Shehee; M B Comer; M H Edgell; C A Hutchison
Journal:  Mol Cell Biol       Date:  1986-01       Impact factor: 4.272

Review 7.  Specific gene amplification in oocytes. Oocyte nuclei contain extrachromosomal replicas of the genes for ribosomal RNA.

Authors:  D D Brown; I B Dawid
Journal:  Science       Date:  1968-04-19       Impact factor: 47.728

8.  A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.

Authors:  A P Feinberg; B Vogelstein
Journal:  Anal Biochem       Date:  1983-07-01       Impact factor: 3.365

Review 9.  Somatic generation of antibody diversity.

Authors:  S Tonegawa
Journal:  Nature       Date:  1983-04-14       Impact factor: 49.962

10.  Transposition and amplification of oncogene-related sequences in human neuroblastomas.

Authors:  N E Kohl; N Kanda; R R Schreck; G Bruns; S A Latt; F Gilbert; F W Alt
Journal:  Cell       Date:  1983-12       Impact factor: 41.582

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  4 in total

1.  A somatic gene rearrangement contributing to genetic diversity in maize.

Authors:  O P Das; S Levi-Minzi; M Koury; M Benner; J Messing
Journal:  Proc Natl Acad Sci U S A       Date:  1990-10       Impact factor: 11.205

2.  Neuronal DNA content variation (DCV) with regional and individual differences in the human brain.

Authors:  Jurjen W Westra; Richard R Rivera; Diane M Bushman; Yun C Yung; Suzanne E Peterson; Serena Barral; Jerold Chun
Journal:  J Comp Neurol       Date:  2010-10-01       Impact factor: 3.215

3.  Differential cloning of genomic DNA: cloning of DNA with an altered primary structure by in-gel competitive reassociation.

Authors:  H Yokota; M Oishi
Journal:  Proc Natl Acad Sci U S A       Date:  1990-08       Impact factor: 11.205

4.  New nucleotide sequence data on the EMBL File Server.

Authors: 
Journal:  Nucleic Acids Res       Date:  1990-06-25       Impact factor: 16.971

  4 in total

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