Literature DB >> 25945707

Recombinant production, crystallization and crystal structure determination of dihydroorotate dehydrogenase from Leishmania (Viannia) braziliensis.

Renata Almeida Garcia Reis1, Eder Lorenzato1, Valeria Cristina Silva1, Maria Cristina Nonato1.   

Abstract

The enzyme dihydroorotate dehydrogenase (DHODH) is a flavoenzyme that catalyses the oxidation of dihydroorotate to orotate in the de novo pyrimidine-biosynthesis pathway. In this study, a reproducible protocol for the heterologous expression of active dihydroorotate dehydrogenase from Leishmania (Viannia) braziliensis (LbDHODH) was developed and its crystal structure was determined at 2.12 Å resolution. L. (V.) braziliensis is the species responsible for the mucosal form of leishmaniasis, a neglected disease for which no cure or effective therapy is available. Analyses of sequence, structural and kinetic features classify LbDHODH as a member of the class 1A DHODHs and reveal a very high degree of structural conservation with the previously reported structures of orthologous trypanosomatid enzymes. The relevance of nucleotide-biosynthetic pathways for cell metabolism together with structural and functional differences from the respective host enzyme suggests that inhibition of LbDHODH could be exploited for antileishmanicidal drug development. The present work provides the framework for further integrated in vitro, in silico and in vivo studies as a new tool to evaluate DHODH as a drug target against trypanosomatid-related diseases.

Entities:  

Keywords:  Leishmania (Viannia) braziliensis; dihydroorotate dehydrogenase; leishmaniasis

Mesh:

Substances:

Year:  2015        PMID: 25945707      PMCID: PMC4427163          DOI: 10.1107/S2053230X15000886

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  27 in total

Review 1.  Recent developments in the medicinal chemistry and therapeutic potential of dihydroorotate dehydrogenase (DHODH) inhibitors.

Authors:  V K Vyas; M Ghate
Journal:  Mini Rev Med Chem       Date:  2011-10       Impact factor: 3.862

2.  Crystal structure of dihydroorotate dehydrogenase from Leishmania major.

Authors:  Artur T Cordeiro; Patricia R Feliciano; Matheus P Pinheiro; M Cristina Nonato
Journal:  Biochimie       Date:  2012-04-21       Impact factor: 4.079

3.  iMOSFLM: a new graphical interface for diffraction-image processing with MOSFLM.

Authors:  T Geoff G Battye; Luke Kontogiannis; Owen Johnson; Harold R Powell; Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

4.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

Review 5.  Target sites for the design of anti-trypanosomatid drugs based on the structure of dihydroorotate dehydrogenase.

Authors:  Matheus Pinto Pinheiro; Flávio da Silva Emery; M Cristina Nonato
Journal:  Curr Pharm Des       Date:  2013       Impact factor: 3.116

Review 6.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

7.  Mucosal Leishmaniasis caused by Leishmania (Viannia) braziliensis and Leishmania (Viannia) guyanensis in the Brazilian Amazon.

Authors:  Jorge Augusto de Oliveira Guerra; Suzane Ribeiro Prestes; Henrique Silveira; Leila Inês de Aguiar Raposo Câmara Coelho; Pricila Gama; Aristoteles Moura; Valdir Amato; Maria das Graças Vale Barbosa; Luiz Carlos de Lima Ferreira
Journal:  PLoS Negl Trop Dis       Date:  2011-03-08

8.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

Review 9.  Management of trypanosomiasis and leishmaniasis.

Authors:  Michael P Barrett; Simon L Croft
Journal:  Br Med Bull       Date:  2012-11-07       Impact factor: 4.291

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

View more
  1 in total

1.  Crystal structures of FMN-bound and FMN-free forms of dihydroorotate dehydrogenase from Trypanosoma brucei.

Authors:  Tomomi Kubota; Osamu Tani; Tomohiko Yamaguchi; Ichiji Namatame; Hitoshi Sakashita; Koji Furukawa; Kazuhiko Yamasaki
Journal:  FEBS Open Bio       Date:  2018-03-06       Impact factor: 2.693

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.