Literature DB >> 25943713

Regulation of Hox orthologues in the oyster Crassostrea gigas evidences a functional role for promoter DNA methylation in an invertebrate.

Emma Saint-Carlier1, Guillaume Riviere2.   

Abstract

DNA methylation within promoter regions (PRDM) controls vertebrate early gene transcription and thereby development, but is neglected outside this group. However, epigenetic features in the oyster Crassostrea gigas suggest functional significance of PDRM in invertebrates. To investigate this, reporter constructs containing in vitro methylated oyster Hox gene promoters were transfected into oyster embryos. The influence of in vivo methylation was studied using bisulfite sequencing and DNA methyltransferase inhibition during development. Our results demonstrate that methylation controls the transcriptional activity of the promoters investigated, unraveling a functional role for PRDM in a lophotrochozoan, an important finding regarding the evolution of epigenetic regulation.
Copyright © 2015 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Development; Epigenetics; Expression; Invertebrates; Methylation; Promoter

Mesh:

Substances:

Year:  2015        PMID: 25943713     DOI: 10.1016/j.febslet.2015.04.043

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  12 in total

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3.  Evolutionary Transition of Promoter and Gene Body DNA Methylation across Invertebrate-Vertebrate Boundary.

Authors:  Thomas E Keller; Priscilla Han; Soojin V Yi
Journal:  Mol Biol Evol       Date:  2015-12-29       Impact factor: 16.240

4.  GigaTON: an extensive publicly searchable database providing a new reference transcriptome in the pacific oyster Crassostrea gigas.

Authors:  Guillaume Riviere; Christophe Klopp; Nabihoudine Ibouniyamine; Arnaud Huvet; Pierre Boudry; Pascal Favrel
Journal:  BMC Bioinformatics       Date:  2015-12-02       Impact factor: 3.169

5.  Insights into Epigenome Evolution from Animal and Plant Methylomes.

Authors:  Soojin V Yi
Journal:  Genome Biol Evol       Date:  2017-11-01       Impact factor: 3.416

6.  Effects of a parental exposure to diuron on Pacific oyster spat methylome.

Authors:  Rodolfo Rondon; Christoph Grunau; Manon Fallet; Nicolas Charlemagne; Rossana Sussarellu; Cristian Chaparro; Caroline Montagnani; Guillaume Mitta; Evelyne Bachère; Farida Akcha; Céline Cosseau
Journal:  Environ Epigenet       Date:  2017-04-19

7.  Molecular and Biochemical Methods Useful for the Epigenetic Characterization of Chromatin-Associated Proteins in Bivalve Molluscs.

Authors:  Ciro Rivera-Casas; Rodrigo Gonzalez-Romero; Rafael A Garduño; Manjinder S Cheema; Juan Ausio; Jose M Eirin-Lopez
Journal:  Front Physiol       Date:  2017-08-08       Impact factor: 4.566

8.  Dynamics of DNA methylomes underlie oyster development.

Authors:  Guillaume Riviere; Yan He; Samuele Tecchio; Elizabeth Crowell; Michaël Gras; Pascal Sourdaine; Ximing Guo; Pascal Favrel
Journal:  PLoS Genet       Date:  2017-06-08       Impact factor: 5.917

Review 9.  Aquaculture genomics, genetics and breeding in the United States: current status, challenges, and priorities for future research.

Authors:  Hisham Abdelrahman; Mohamed ElHady; Acacia Alcivar-Warren; Standish Allen; Rafet Al-Tobasei; Lisui Bao; Ben Beck; Harvey Blackburn; Brian Bosworth; John Buchanan; Jesse Chappell; William Daniels; Sheng Dong; Rex Dunham; Evan Durland; Ahmed Elaswad; Marta Gomez-Chiarri; Kamal Gosh; Ximing Guo; Perry Hackett; Terry Hanson; Dennis Hedgecock; Tiffany Howard; Leigh Holland; Molly Jackson; Yulin Jin; Karim Khalil; Thomas Kocher; Tim Leeds; Ning Li; Lauren Lindsey; Shikai Liu; Zhanjiang Liu; Kyle Martin; Romi Novriadi; Ramjie Odin; Yniv Palti; Eric Peatman; Dina Proestou; Guyu Qin; Benjamin Reading; Caird Rexroad; Steven Roberts; Mohamed Salem; Andrew Severin; Huitong Shi; Craig Shoemaker; Sheila Stiles; Suxu Tan; Kathy F J Tang; Wilawan Thongda; Terrence Tiersch; Joseph Tomasso; Wendy Tri Prabowo; Roger Vallejo; Hein van der Steen; Khoi Vo; Geoff Waldbieser; Hanping Wang; Xiaozhu Wang; Jianhai Xiang; Yujia Yang; Roger Yant; Zihao Yuan; Qifan Zeng; Tao Zhou
Journal:  BMC Genomics       Date:  2017-02-20       Impact factor: 3.969

10.  Epigenetic DNA Methylation Mediating Octopus vulgaris Early Development: Effect of Essential Fatty Acids Enriched Diet.

Authors:  Pablo García-Fernández; Danie García-Souto; Eduardo Almansa; Paloma Morán; Camino Gestal
Journal:  Front Physiol       Date:  2017-05-16       Impact factor: 4.566

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