Literature DB >> 25936995

Recurrent and novel GLB1 mutations in India.

Abdul Mueed Bidchol1, Ashwin Dalal2, Rakesh Trivedi3, Anju Shukla1, Sheela Nampoothiri4, V H Sankar5, Sumita Danda6, Neerja Gupta7, Madhulika Kabra7, Shrikiran A Hebbar8, Ramesh Y Bhat8, Divya Matta2, Alka V Ekbote6, Ratna Dua Puri9, Shubha R Phadke10, Kalpana Gowrishankar11, Shagun Aggarwal12, Prajnya Ranganath12, Sheetal Sharda13, Mahesh Kamate14, Chaitanya A Datar15, Kamalakshi Bhat16, Nutan Kamath16, Hitesh Shah17, Shuba Krishna18, Puthiya Mundyat Gopinath19, Ishwar C Verma9, H A Nagarajaram20, Kapaettu Satyamoorthy19, Katta Mohan Girisha21.   

Abstract

GM1 gangliosidosis is a lysosomal storage disorder caused by mutations in the GLB1 gene, leading to the deficiency of the enzyme β-d-galactosidase. In this study, we report molecular findings in 50 Asian Indian families with GM1 gangliosidosis. We sequenced all the exons and flanking intronic sequences of GLB1 gene. We identified 33 different mutations (20 novel and 13 previously reported). The novel mutations include 12 missense (p.M1?, p.E129Q, p.G134R, p.L236P, p.G262E, p.L297F, p.Y331C, p.G414V, p.K493N, p.L514P, p.P597L, p.T600I), four splicing (c.246-2A>G, c.397-2A>G, c.552+1G>T, c.956-2A>G), three indels (p.R22Qfs*8, p.L24Cfs*47, p.I489Qfs*4) and one nonsense mutation (p.Q452*). Most common mutations identified in this study were c.75+2InsT (14%) and p.L337P (10%). Known mutations accounted for 67% of allele frequency in our cohort of patients, suggesting that these mutations in GLB1 are recurrent across different populations. Twenty three mutations were localized in the TIM barrel domain, β-domain 1 and β-domain 2. In silico sequence and structure analysis of GLB1 reveal that all the novel mutations affect the function and structure of the protein. We hereby report on the largest series of patients with GM1 gangliosidosis and the first from India.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  GLB1 gene; GM1 gangliosidosis; India; Mutation

Mesh:

Substances:

Year:  2015        PMID: 25936995     DOI: 10.1016/j.gene.2015.04.078

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  8 in total

Review 1.  The natural history of Type 1 infantile GM1 gangliosidosis: A literature-based meta-analysis.

Authors:  Frederick M Lang; Paul Korner; Mark Harnett; Ajith Karunakara; Cynthia J Tifft
Journal:  Mol Genet Metab       Date:  2019-12-30       Impact factor: 4.797

2.  Multi-gene testing in neurological disorders showed an improved diagnostic yield: data from over 1000 Indian patients.

Authors:  Aparna Ganapathy; Avshesh Mishra; Megha Rani Soni; Priyanka Kumar; Mukunth Sadagopan; Anil Vittal Kanthi; Irene Rosetta Pia Patric; Sobha George; Aparajit Sridharan; T C Thyagarajan; S L Aswathy; H K Vidya; Swathi M Chinnappa; Swetha Nayanala; Manasa B Prakash; Vijayashree G Raghavendrachar; Minothi Parulekar; Vykuntaraju K Gowda; Sheela Nampoothiri; Ramshekhar N Menon; Divya Pachat; Vrajesh Udani; Neeta Naik; Mahesh Kamate; A Radha Rama Devi; P A Mohammed Kunju; Mohandas Nair; Anaita Udwadia Hegde; M Pradeep Kumar; Soumya Sundaram; Preetha Tilak; Ratna D Puri; Krati Shah; Jayesh Sheth; Qurratulain Hasan; Frenny Sheth; Pooja Agrawal; Shanmukh Katragadda; Vamsi Veeramachaneni; Vijay Chandru; Ramesh Hariharan; Ashraf U Mannan
Journal:  J Neurol       Date:  2019-05-08       Impact factor: 4.849

3.  Clinical and Laboratory Profile of Gangliosidosis from Southern Part of India.

Authors:  Vykuntaraju K Gowda; Priya Gupta; Narmadham K Bharathi; Maya Bhat; Sanjay K Shivappa; Naveen Benakappa
Journal:  J Pediatr Genet       Date:  2020-10-19

Review 4.  A review of skeletal dysplasia research in India.

Authors:  A Uttarilli; H Shah; A Shukla; K M Girisha
Journal:  J Postgrad Med       Date:  2018 Apr-Jun       Impact factor: 1.476

5.  Axonopathy and Reduction of Membrane Resistance: Key Features in a New Murine Model of Human GM1-Gangliosidosis.

Authors:  Deborah Eikelberg; Annika Lehmbecker; Graham Brogden; Witchaya Tongtako; Kerstin Hahn; Andre Habierski; Julia B Hennermann; Hassan Y Naim; Felix Felmy; Wolfgang Baumgärtner; Ingo Gerhauser
Journal:  J Clin Med       Date:  2020-04-02       Impact factor: 4.241

Review 6.  Emerging cellular themes in leukodystrophies.

Authors:  Joseph C Nowacki; Ashley M Fields; Meng Meng Fu
Journal:  Front Cell Dev Biol       Date:  2022-08-08

7.  Defining the genetic basis of early onset hereditary spastic paraplegia using whole genome sequencing.

Authors:  Kishore R Kumar; G M Wali; Mahesh Kamate; Gautam Wali; André E Minoche; Clare Puttick; Mark Pinese; Velimir Gayevskiy; Marcel E Dinger; Tony Roscioli; Carolyn M Sue; Mark J Cowley
Journal:  Neurogenetics       Date:  2016-09-28       Impact factor: 2.660

8.  Hypomyelinating disorders in China: The clinical and genetic heterogeneity in 119 patients.

Authors:  Haoran Ji; Dongxiao Li; Ye Wu; Quanli Zhang; Qiang Gu; Han Xie; Taoyun Ji; Huifang Wang; Lu Zhao; Haijuan Zhao; Yanling Yang; Hongchun Feng; Hui Xiong; Jinhua Ji; Zhixian Yang; Liping Kou; Ming Li; Xinhua Bao; Xingzhi Chang; Yuehua Zhang; Li Li; Huijuan Li; Zhengping Niu; Xiru Wu; Jiangxi Xiao; Yuwu Jiang; Jingmin Wang
Journal:  PLoS One       Date:  2018-02-16       Impact factor: 3.240

  8 in total

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