Literature DB >> 25929789

Molecular phylogeny and a modified approach of character-based barcoding refining the taxonomy of New Caledonian freshwater gastropods (Caenogastropoda, Truncatelloidea, Tateidae).

Susan Zielske1, Martin Haase2.   

Abstract

The islands of New Caledonia represent one of the world's biodiversity hotspots with many endemic species including freshwater gastropods of the family Tateidae. A phylogenetic analysis based on the mitochondrial COI and 16S rRNA and the nuclear ITS2 genes revealed two cryptic genera, Crosseana gen. n. and Novacaledonia gen. n. In order to provide character-based diagnoses we modified a DNA barcoding approach identifying strings of pairwise diagnostic characters, i.e. alignment positions, at which two genera are alternatively fixed for different nucleotides. The combination or string of all pairwise diagnostic characters was unique for each genus. Inconsistent mitochondrial and nuclear topologies suggest that Hemistomia cockerelli Haase and Bouchet, 1998 and H. fabrorum Haase and Bouchet, 1998, two morphologically well-defined species, hybridize. The age of the most recent common ancestor of the New Caledonian radiation of Tateidae was estimated at 24.6±9.5 MY. These findings are in line with the notion that New Caledonia is rather a Darwinian island that was colonized after an extended phase of submergence - in case of the tateids probably from Australia - despite being a fragment of Gondwanaland.
Copyright © 2015 Elsevier Inc. All rights reserved.

Keywords:  CAOS; Dated phylogeny; Hybridization; Introgression; Rissooidea; South Pacific

Mesh:

Substances:

Year:  2015        PMID: 25929789     DOI: 10.1016/j.ympev.2015.04.020

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  5 in total

1.  DeSignate: detecting signature characters in gene sequence alignments for taxon diagnoses.

Authors:  Thomas Hütter; Maximilian H Ganser; Manuel Kocher; Merima Halkic; Sabine Agatha; Nikolaus Augsten
Journal:  BMC Bioinformatics       Date:  2020-04-20       Impact factor: 3.169

2.  Five new cryptic freshwater gastropod species from New Caledonia (Caenogastropoda, Truncatelloidea, Tateidae).

Authors:  Martin Haase; Susan Zielske
Journal:  Zookeys       Date:  2015-09-28       Impact factor: 1.546

3.  Conflict of mitochondrial phylogeny and morphology-based classification in a pair of freshwater gastropods (Caenogastropoda, Truncatelloidea, Tateidae) from New Caledonia.

Authors:  Marlen Becker; Susan Zielske; Martin Haase
Journal:  Zookeys       Date:  2016-07-06       Impact factor: 1.546

4.  Updating the Phylogenetic Dating of New Caledonian Biodiversity with a Meta-analysis of the Available Evidence.

Authors:  Romain Nattier; Roseli Pellens; Tony Robillard; Hervé Jourdan; Frédéric Legendre; Maram Caesar; André Nel; Philippe Grandcolas
Journal:  Sci Rep       Date:  2017-06-16       Impact factor: 4.379

5.  Phylogeography and molecular species delimitation reveal cryptic diversity in Potamolithus (Caenogastropoda: Tateidae) of the southwest basin of the Andes.

Authors:  Gonzalo A Collado; Cristian Torres-Díaz; Moisés A Valladares
Journal:  Sci Rep       Date:  2021-08-03       Impact factor: 4.379

  5 in total

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