Literature DB >> 25928187

A PreSTIGEous use of LncRNAs to predict enhancers.

Shino Murakami1, Shrikanth S Gadad, W Lee Kraus.   

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Year:  2015        PMID： 25928187      PMCID： PMC4613520          DOI： 10.1080/15384101.2015.1032650

Source DB:  PubMed          Journal:  Cell Cycle        ISSN： 1551-4005            Impact factor:   4.534


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  7 in total

Review 1.  Regulation of transcription by long noncoding RNAs.

Authors:  Roberto Bonasio; Ramin Shiekhattar
Journal:  Annu Rev Genet       Date:  2014-09-18       Impact factor: 16.830

Review 2.  Hormone-regulated transcriptomes: lessons learned from estrogen signaling pathways in breast cancer cells.

Authors:  Nasun Hah; W Lee Kraus
Journal:  Mol Cell Endocrinol       Date:  2013-06-28       Impact factor: 4.102

3.  Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis.

Authors:  Rajnish A Gupta; Nilay Shah; Kevin C Wang; Jeewon Kim; Hugo M Horlings; David J Wong; Miao-Chih Tsai; Tiffany Hung; Pedram Argani; John L Rinn; Yulei Wang; Pius Brzoska; Benjamin Kong; Rui Li; Robert B West; Marc J van de Vijver; Saraswati Sukumar; Howard Y Chang
Journal:  Nature       Date:  2010-04-15       Impact factor: 49.962

4.  Combinatorial effects of multiple enhancer variants in linkage disequilibrium dictate levels of gene expression to confer susceptibility to common traits.

Authors:  Olivia Corradin; Alina Saiakhova; Batool Akhtar-Zaidi; Lois Myeroff; Joseph Willis; Richard Cowper-Sal lari; Mathieu Lupien; Sanford Markowitz; Peter C Scacheri
Journal:  Genome Res       Date:  2013-11-06       Impact factor: 9.043

5.  Fine-scale chromatin interaction maps reveal the cis-regulatory landscape of human lincRNA genes.

Authors:  Wenxiu Ma; Ferhat Ay; Choli Lee; Gunhan Gulsoy; Xinxian Deng; Savannah Cook; Jennifer Hesson; Christopher Cavanaugh; Carol B Ware; Anton Krumm; Jay Shendure; Carl Anthony Blau; Christine M Disteche; William S Noble; Zhijun Duan
Journal:  Nat Methods       Date:  2014-12-01       Impact factor: 28.547

6.  Long ncRNA expression associates with tissue-specific enhancers.

Authors:  Dubravka Vučićević; Olivia Corradin; Evgenia Ntini; Peter C Scacheri; Ulf Andersson Ørom
Journal:  Cell Cycle       Date:  2015       Impact factor: 4.534

7.  Enhancer transcripts mark active estrogen receptor binding sites.

Authors:  Nasun Hah; Shino Murakami; Anusha Nagari; Charles G Danko; W Lee Kraus
Journal:  Genome Res       Date:  2013-05-01       Impact factor: 9.043
  7 in total
  3 in total

Review 1.  Long non-coding RNAs as novel players in β cell function and type 1 diabetes.

Authors:  Aashiq H Mirza; Simranjeet Kaur; Flemming Pociot
Journal:  Hum Genomics       Date:  2017-07-24       Impact factor: 4.639

2.  Evaluate the immune-related eRNA models and signature score to predict the response to immunotherapy in thyroid carcinoma.

Authors:  Pu Wu; Jinyuan Shi; Zhiyuan Wang; Wei Sun; Hao Zhang
Journal:  Cancer Cell Int       Date:  2022-10-10       Impact factor: 6.429

3.  Identification and Validation of an Immune-Related eRNA Prognostic Signature for Hepatocellular Carcinoma.

Authors:  Shenglan Cai; Xingwang Hu; Ruochan Chen; Yiya Zhang
Journal:  Front Genet       Date:  2021-06-11       Impact factor: 4.599
  3 in total

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