| Literature DB >> 25922796 |
Bin Xu1, Jian-Xiong Ma2, Xin-Long Ma2, Hao-Bo Jia2, Rui Feng2, Li-Yan Xu2.
Abstract
To comprehensively evaluate the association between rs7517847 and rs2201841 polymorphisms in the Interleukin-23 (IL-23) receptor gene and ankylosing spondylitis (AS), a meta-analysis was performed. The Pubmed, Embase, MEDLINE, Cochrane, China National Knowledge Infrastructure (CNKI), VIP, Wanfang and China Biology Medicine disc (CBMdisc) databases were searched to identify eligible studies on rs7517847 and rs2201841 polymorphisms in the IL-23 receptor gene and AS that were published through September 2014. Data of interest were extracted from each study, and the meta-analysis was performed using STATA 12.0. Four studies were eligible for the meta-analysis and included a total patient population of 2,465. With regards to rs7517847, the current study showed that the genotype GG and allele G might play a protective role during AS (OR = 0.76, 95% CI [0.59-0.99]; OR = 0.88, 95% CI [0.78-0.99] for homozygote and allelic models, respectively). However, according to the meta-analysis, there was no statistical association between the genotype or allele of rs2201841 and an individual's susceptibility to AS in all genetic models. In conclusion, it was the IL-23 rs7517847 polymorphism rather than the rs2201841 polymorphism that had a statistical association with AS. Nevertheless, more evidence is needed to confirm this result. Consequently, it is necessary to carry out more high-quality studies to confirm the associations between these two single nucleotide polymorphisms and AS.Entities:
Keywords: Ankylosing spondylitis; Interleukin-23 receptor; Meta-analysis; SNPs
Year: 2015 PMID: 25922796 PMCID: PMC4411516 DOI: 10.7717/peerj.910
Source DB: PubMed Journal: PeerJ ISSN: 2167-8359 Impact factor: 2.984
The full search strategy for Embase.
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| il AND 23 |
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| #1 OR #2 |
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| ankylosing AND (‘spondylitis’/exp OR spondylitis) |
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| ankylopoietic AND (‘spondylarthritis’/exp OR spondylarthritis) |
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| ankylopoietic AND (‘spondylitis’/exp OR spondylitis) |
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| ankylosing AND (‘spine’/exp OR spine) |
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| ankylosing AND spondylitis |
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| Ankylosing AND (‘spondylarthritis’/exp OR spondylarthritis) |
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| Ankylosing AND (‘spondylarthrosis’/exp OR spondylarthrosis) |
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| ‘ankylosis’/exp OR ankylosis AND (‘spondylitis’/exp OR spondylitis) |
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| Ankylotic AND (‘spondylitis’/exp OR spondylitis) |
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| Bechterew AND (‘disease’/exp OR disease) |
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| Bekhterev AND (‘disease’/exp OR disease) |
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| Morbus AND bechterew |
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| Spinal AND (‘ankylosis’/exp OR ankylosis) |
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| ‘spine’/exp OR spine AND (‘ankylosis’/exp OR ankylosis) |
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| ‘spondylarthritis’/exp OR spondylarthritis AND ankylopoietica |
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| ‘spondylarthritis’/exp OR spondylarthritis AND ankylosans |
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| ‘spondylarthrosis’/exp OR spondylarthrosis AND ankylopoietica |
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| ‘spondylitis’/exp OR spondylitis AND ankylopoetica |
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| ‘spondylitis’/exp OR spondylitis AND ankylopoietica |
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| Spondylitis, AND ankylosing |
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| ‘spondyloarthritis’/exp OR spondyloarthritis AND ankylopoietica |
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| Vertebral and (‘ankylosis’/exp OR ankylosis) |
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| #4 OR #5 OR #6 OR #7 OR #8 OR #9 OR #10 OR #11 OR #12 OR #13 OR #14 OR #15 OR #16 OR #17 OR #18 OR #19 OR #20 OR #21 OR #22 OR #23 OR #24 OR #25 |
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| ‘single nucleotide polymorphism’/exp |
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| Polymorphism, AND single AND (‘nucleotide’/exp OR nucleotide) |
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| Single AND (‘nucleotide’/exp OR nucleotide) AND polymorphism |
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| #27 OR #28 OR #29 |
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| #3 AND #26 AND #30 |
Figure 1PRISMA flowchart of number of studies.
Main characteristics of studies included in this meta-analysis.
| Author | Year | Country | Ethnicity | SNP | AS group | Control group | Test method | HWE | Source |
|---|---|---|---|---|---|---|---|---|---|
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| 2013 | China | Asian |
| 291 | 312 | PCR-RFLP | Y | Blood |
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| 2009 | China | Asian |
| 144 | 143 | PCR-HRM | Y | Blood |
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| 2009 | China | Asian |
| 116 | 102 | PCR-HRM | Y | Blood |
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| 2009 | Hungary | Caucasian |
| 206 | 235 | PCR-RFLP | Y | Blood |
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| 2008 | Spanish | Caucasian |
| 365 | 500 | Taqman | Y | Blood |
Notes.
first author
Hardy-Weinberg Equilibrium
Quality assessment of studies.
| Study included | Selection | Comparability | Exposure | Total |
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| 1. | 3 | 2 | 2 | 7 |
| 2. | 3 | 2 | 2 | 7 |
| 3. | 3 | 1 | 2 | 6 |
| 4. | 3 | 1 | 2 | 6 |
Genotype distribution of rs7517847 and rs2201841 associated with IL-23.
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| Author | Ethnicity | Group | TT | GT | GG | MAF | CC | CT | TT | MAF |
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| Asian | AS | 104 | 146 | 41 | 0.39 | – | – | – | – |
| control | 98 | 153 | 61 | 0.44 | – | – | – | – | ||
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| Caucasian | AS | 67 | 115 | 24 | 0.40 | 26 | 89 | 91 | 0.34 |
| control | 69 | 126 | 40 | 0.44 | 15 | 102 | 118 | 0.28 | ||
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| Asian | AS | 61 | 59 | 24 | 0.37 | 64 | 40 | 12 | 0.28 |
| control | 48 | 77 | 18 | 0.40 | 54 | 41 | 7 | 0.27 | ||
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| Caucasian | AS | 140 | 172 | 53 | 0.38 | – | – | – | – |
| control | 182 | 238 | 80 | 0.40 | – | – | – | – | ||
Notes.
no available data
minor allelic frequencies
Meta-analysis of polymorphisms of rs7517847.
| SNP |
| Genetic model | OR (95% CI) |
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| 4 | Homozygote model GG vs. TT | 0.76 (0.59, 0.99) | 0.038 | 0% |
| Heterozygote model GT vs. TT | 0.87 (0.73, 1.05) | 0.157 | 0% | ||
| Allelic model G vs. T | 0.88 (0.78, 0.99) | 0.032 | 0% | ||
| Recessive model GG vs. (TT + GT) | 0.82 (0.65, 1.03) | 0.090 | 28.2% | ||
| Dominant model (GG + GT) vs. TT | 0.85 (0.71, 1.01) | 0.066 | 0% |
Notes.
number of studies included
Figure 2Forest plot of genetic association studies of rs7517847.
(A) genotype GG vs. TT; (B) allele G vs. allele T. The horizontal axis: axis of Odds Ratio (OR). The dotted line: mean value of overall OR.
Meta-analysis of polymorphisms of rs2201841.
| SNP |
| Genetic model | OR (95% CI) |
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| 2 | Homozygote model CC vs. TT | 0.87 (0.50, 1.51) | 0.631 | 0% |
| Heterozygote model CT vs. TT | 0.93 (0.62, 1.40) | 0.726 | 4.70% | ||
| Allelic model C vs. T | 0.99 (0.77, 1.27) | 0.915 | 0% | ||
| Recessive model CC vs. (TT + CT) | 1.04 (0.69, 1.55) | 0.866 | 0% | ||
| Dominant model (CC + CT) vs. TT | 0.94 (0.64, 1.38) | 0.746 | 0% |
Notes.
number of studies included
Figure 3Forest plot of genetic association studies of rs2201841 homozygote model (CC vs. TT).
The horizontal axis: axis of Odds Ratio (OR). The dotted line: mean value of overall OR.
Results of subgroup analysis of rs7517847 by ethnicity.
| Ethnicity | |||||
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| Asian | Caucasian | ||||
| SNP | Genetic model | OR (95% CI) | OR (95% CI) | ||
| Homozygote model (GG/TT) | 0.74 (0.50–1.10) | 0.140 | 0.78 (0.55–1.09) | 0.143 | |
| Heterozygote model (GT/TT) | 0.79 (0.59–1.05) | 0.109 | 0.94 (0.74–1.20) | 0.613 | |
| Recessive model (GG/ GT + TT) | 0.84 (0.59–1.20) | 0.335 | 0.80 (0.59–1.09) | 0.161 | |
| Dominant model (GG + GT/TT) | 0.78 (0.59–1.02) | 0.071 | 0.90 (0.72–1.13) | 0.373 | |
| Allelic model (G/T) | 0.84 (0.70–1.02) | 0.080 | 0.90 (0.77–1.05) | 0.181 | |