Literature DB >> 25920724

Thermus amyloliquefaciens sp. nov., isolated from a hot spring sediment sample.

Tian-Tian Yu1, Hong Ming2, Ji-Cheng Yao3, En-Min Zhou4, Dong-Jin Park5, Wael N Hozzein6, Chang-Jin Kim5, Mohammed A M Wadaan6, Wen-Jun Li4.   

Abstract

A Gram-stain-negative, aerobic bacterium, designated strain YIM 77409T, was isolated from the Niujie hot spring in the Eryuan county of Dali, Yunnan province, south-west China. Cells of the strain were rod-shaped and colonies were yellow and circular. The strain grew at pH 6.0-8.0 (optimum, pH 7.0) and 50-70°C (optimum, 60-65°C). The predominant menaquinone was MK-8 and the DNA G+C content was 66.4 mol%. Major fatty acids (>10 %) were iso-C15 : 0 and iso-C17 : 0.The polar lipids consisted of one aminophospholipid, one phospholipid and two glycolipids. 16S rRNA gene sequence analysis showed that strain YIM 77409T formed a cluster with Thermus scotoductus DSM 8553T, Thermus antranikianii DSM 12462T, Thermus caliditerrae YIM 77925T and Thermus tengchongensis YIM 77924T, with highest 16S rRNA gene sequence similarity to T. scotoductus DSM 8553T (97.57%). However, DNA-DNA hybridization indicated that strain YIM 77409T should be viewed as a representative of a novel species, as there was only 30.6 ± 1.6% reassociation with T. scotoductus DSM 8553T. On the basis of the morphological and chemotaxonomic characteristics, as well as the genotypic data, it is proposed that strain YIM 77409T represents a novel species of the genus Thermus, with the name Thermus amyloliquefaciens sp. nov. The type strain is YIM 77409T ( = DSM 25898T = KCTC 32024T).

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Year:  2015        PMID: 25920724     DOI: 10.1099/ijs.0.000289

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  6 in total

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Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

2.  Incomplete denitrification phenotypes in diverse Thermus species from diverse geothermal spring sediments and adjacent soils in southwest China.

Authors:  Chrisabelle C Mefferd; Enmin Zhou; Cale O Seymour; Noel A Bernardo; Shreya Srivastava; Amanda J Bengtson; Jian-Yu Jiao; Hailiang Dong; Wen-Jun Li; Brian P Hedlund
Journal:  Extremophiles       Date:  2022-07-08       Impact factor: 3.035

3.  High-quality draft genome sequence of the Thermus amyloliquefaciens type strain YIM 77409(T) with an incomplete denitrification pathway.

Authors:  En-Min Zhou; Senthil K Murugapiran; Chrisabelle C Mefferd; Lan Liu; Wen-Dong Xian; Yi-Rui Yin; Hong Ming; Tian-Tian Yu; Marcel Huntemann; Alicia Clum; Manoj Pillay; Krishnaveni Palaniappan; Neha Varghese; Natalia Mikhailova; Dimitrios Stamatis; T B K Reddy; Chew Yee Ngan; Chris Daum; Nicole Shapiro; Victor Markowitz; Natalia Ivanova; Alexander Spunde; Nikos Kyrpides; Tanja Woyke; Wen-Jun Li; Brian P Hedlund
Journal:  Stand Genomic Sci       Date:  2016-02-27

4.  Complete Genome Analysis of Thermus parvatiensis and Comparative Genomics of Thermus spp. Provide Insights into Genetic Variability and Evolution of Natural Competence as Strategic Survival Attributes.

Authors:  Charu Tripathi; Harshita Mishra; Himani Khurana; Vatsala Dwivedi; Komal Kamra; Ram K Negi; Rup Lal
Journal:  Front Microbiol       Date:  2017-07-27       Impact factor: 5.640

5.  Contrasting Diversity and Composition of Human Colostrum Microbiota in a Maternal Cohort With Different Ethnic Origins but Shared Physical Geography (Island Scale).

Authors:  Wanying Xie; Huimin Zhang; Yongqing Ni; Yunhua Peng
Journal:  Front Microbiol       Date:  2022-07-12       Impact factor: 6.064

6.  Microbial biogeography of 925 geothermal springs in New Zealand.

Authors:  Jean F Power; Carlo R Carere; Charles K Lee; Georgia L J Wakerley; David W Evans; Mathew Button; Duncan White; Melissa D Climo; Annika M Hinze; Xochitl C Morgan; Ian R McDonald; S Craig Cary; Matthew B Stott
Journal:  Nat Commun       Date:  2018-07-23       Impact factor: 14.919

  6 in total

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