Literature DB >> 25920671

Using ABC and microsatellite data to detect multiple introductions of invasive species from a single source.

A Benazzo1, S Ghirotto1, S T Vilaça1, S Hoban2.   

Abstract

The introduction of invasive species to new locations (that is, biological invasions) can have major impact on biodiversity, agriculture and public health. As such, determining the routes and modality of introductions with genetic data has become a fundamental goal in molecular ecology. To assist with this goal, new statistical methods and frameworks have been developed, such as approximate Bayesian computation (ABC) for inferring invasion history. Here, we present a model of invasion accounting for multiple introductions from a single source (MISS), a heretofore largely unexplored model. We simulate microsatellite data to evaluate the power of ABC to distinguish between single and multiple introductions from the same source, under a range of demographic parameters. We also apply ABC to microsatellite data from three invasions of bumblebee in New Zealand. In addition, we assess the performance of several methods of summary statistics selection. Our simulated results suggested good ability to distinguish between one- and two-wave models over much but not all of the parameter space tested, independent of summary statistics used. Globally, parameter estimation was good except for bottleneck timing. For one of the bumblebee species, we clearly rejected the MISS model, while for the other two we found inconclusive results. Since a second wave may provide genetic reinforcement to initial colonists, help relieve inbreeding among founders, or increase the hazard of the invasion, its detection may be crucial for managing invasions; we suggest that the MISS model could be considered as a potential model in future theoretical and empirical studies of invasions.

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Year:  2015        PMID: 25920671      PMCID: PMC4814240          DOI: 10.1038/hdy.2015.38

Source DB:  PubMed          Journal:  Heredity (Edinb)        ISSN: 0018-067X            Impact factor:   3.821


  42 in total

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Authors:  Arnaud Estoup; Thomas Guillemaud
Journal:  Mol Ecol       Date:  2010-08-13       Impact factor: 6.185

Review 3.  Approximate Bayesian Computation (ABC) in practice.

Authors:  Katalin Csilléry; Michael G B Blum; Oscar E Gaggiotti; Olivier François
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Review 4.  ABC as a flexible framework to estimate demography over space and time: some cons, many pros.

Authors:  G Bertorelle; A Benazzo; S Mona
Journal:  Mol Ecol       Date:  2010-06-18       Impact factor: 6.185

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Journal:  Ecol Appl       Date:  2006-12       Impact factor: 4.657

6.  Identifying the source of species invasions: sampling intensity vs. genetic diversity.

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7.  Fine-scale spatial and temporal population genetics of Aedes japonicus, a new US mosquito, reveal multiple introductions.

Authors:  D M Fonseca; A K Widdel; M Hutchinson; S-E Spichiger; L D Kramer
Journal:  Mol Ecol       Date:  2010-03-22       Impact factor: 6.185

Review 8.  Biological invasions in agricultural settings: insights from evolutionary biology and population genetics.

Authors:  Thomas Guillemaud; Marc Ciosi; Eric Lombaert; Arnaud Estoup
Journal:  C R Biol       Date:  2011-02-01       Impact factor: 1.583

9.  Bridgehead effect in the worldwide invasion of the biocontrol harlequin ladybird.

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Journal:  PLoS One       Date:  2010-03-17       Impact factor: 3.240

10.  Evolutionary limits ameliorate the negative impact of an invasive plant.

Authors:  Richard A Lankau; Victoria Nuzzo; Greg Spyreas; Adam S Davis
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-21       Impact factor: 11.205

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Journal:  Mol Biol Evol       Date:  2017-04-01       Impact factor: 16.240

3.  Multispecies Outcomes of Sympatric Speciation after Admixture with the Source Population in Two Radiations of Nicaraguan Crater Lake Cichlids.

Authors:  Andreas F Kautt; Gonzalo Machado-Schiaffino; Axel Meyer
Journal:  PLoS Genet       Date:  2016-06-30       Impact factor: 5.917

  3 in total

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