Literature DB >> 25917908

Elucidation of the Photorhabdus temperata Genome and Generation of a Transposon Mutant Library To Identify Motility Mutants Altered in Pathogenesis.

Sheldon Hurst1, Holli Rowedder1, Brandye Michaels1, Hannah Bullock1, Ryan Jackobeck1, Feseha Abebe-Akele1, Umjia Durakovic1, Jon Gately1, Erik Janicki1, Louis S Tisa2.   

Abstract

UNLABELLED: The entomopathogenic nematode Heterorhabditis bacteriophora forms a specific mutualistic association with its bacterial partner Photorhabdus temperata. The microbial symbiont is required for nematode growth and development, and symbiont recognition is strain specific. The aim of this study was to sequence the genome of P. temperata and identify genes that plays a role in the pathogenesis of the Photorhabdus-Heterorhabditis symbiosis. A draft genome sequence of P. temperata strain NC19 was generated. The 5.2-Mb genome was organized into 17 scaffolds and contained 4,808 coding sequences (CDS). A genetic approach was also pursued to identify mutants with altered motility. A bank of 10,000 P. temperata transposon mutants was generated and screened for altered motility patterns. Five classes of motility mutants were identified: (i) nonmotile mutants, (ii) mutants with defective or aberrant swimming motility, (iii) mutant swimmers that do not require NaCl or KCl, (iv) hyperswimmer mutants that swim at an accelerated rate, and (v) hyperswarmer mutants that are able to swarm on the surface of 1.25% agar. The transposon insertion sites for these mutants were identified and used to investigate other physiological properties, including insect pathogenesis. The motility-defective mutant P13-7 had an insertion in the RNase II gene and showed reduced virulence and production of extracellular factors. Genetic complementation of this mutant restored wild-type activity. These results demonstrate a role for RNA turnover in insect pathogenesis and other physiological functions. IMPORTANCE: The relationship between Photorhabdus and entomopathogenic nematode Heterorhabditis represents a well-known mutualistic system that has potential as a biological control agent. The elucidation of the genome of the bacterial partner and role that RNase II plays in its life cycle has provided a greater understanding of Photorhabdus as both an insect pathogen and a nematode symbiont.
Copyright © 2015, American Society for Microbiology. All Rights Reserved.

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Year:  2015        PMID: 25917908      PMCID: PMC4455270          DOI: 10.1128/JB.00197-15

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  64 in total

Review 1.  Photorhabdus: towards a functional genomic analysis of a symbiont and pathogen.

Authors:  Richard ffrench-Constant; Nicholas Waterfield; Phillip Daborn; Susan Joyce; Helen Bennett; Candy Au; Andrea Dowling; Sam Boundy; Stuart Reynolds; David Clarke
Journal:  FEMS Microbiol Rev       Date:  2003-01       Impact factor: 16.408

2.  Bacterial biosynthesis of a multipotent stilbene.

Authors:  Susan A Joyce; Alexander O Brachmann; Itamar Glazer; Lea Lango; Gertrud Schwär; David J Clarke; Helge B Bode
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

3.  Phase Variation in Xenorhabdus nematophilus and Photorhabdus luminescens: Differences in Respiratory Activity and Membrane Energization.

Authors:  A J Smigielski; R J Akhurst; N E Boemare
Journal:  Appl Environ Microbiol       Date:  1994-01       Impact factor: 4.792

4.  A type II polyketide synthase is responsible for anthraquinone biosynthesis in Photorhabdus luminescens.

Authors:  Alexander O Brachmann; Susan A Joyce; Holger Jenke-Kodama; Gertrud Schwär; David J Clarke; Helge B Bode
Journal:  Chembiochem       Date:  2007-09-24       Impact factor: 3.164

5.  Genomic islands in Photorhabdus.

Authors:  Nicholas R Waterfield; Phillip J Daborn; Richard H ffrench-Constant
Journal:  Trends Microbiol       Date:  2002-12       Impact factor: 17.079

6.  antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences.

Authors:  Marnix H Medema; Kai Blin; Peter Cimermancic; Victor de Jager; Piotr Zakrzewski; Michael A Fischbach; Tilmann Weber; Eriko Takano; Rainer Breitling
Journal:  Nucleic Acids Res       Date:  2011-06-14       Impact factor: 16.971

7.  Evolutionary origins of genomic repertoires in bacteria.

Authors:  Emmanuelle Lerat; Vincent Daubin; Howard Ochman; Nancy A Moran
Journal:  PLoS Biol       Date:  2005-04-05       Impact factor: 8.029

8.  Dissecting the bacterial type VI secretion system by a genome wide in silico analysis: what can be learned from available microbial genomic resources?

Authors:  Frédéric Boyer; Gwennaële Fichant; Jérémie Berthod; Yves Vandenbrouck; Ina Attree
Journal:  BMC Genomics       Date:  2009-03-12       Impact factor: 3.969

9.  Identification and functional characterization of gene components of Type VI Secretion system in bacterial genomes.

Authors:  Sakshi Shrivastava; Sharmila S Mande
Journal:  PLoS One       Date:  2008-08-13       Impact factor: 3.240

Review 10.  The importance of proteins of the RNase II/RNB-family in pathogenic bacteria.

Authors:  Rute G Matos; Cátia Bárria; Ricardo N Moreira; Susana Barahona; Susana Domingues; Cecília M Arraiano
Journal:  Front Cell Infect Microbiol       Date:  2014-06-03       Impact factor: 5.293

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  5 in total

1.  Draft Genome Sequence of Photorhabdus luminescens subsp. laumondii HP88, an Entomopathogenic Bacterium Isolated from Nematodes.

Authors:  Shimaa Ghazal; Rediet Oshone; Stephen Simpson; Krystalynne Morris; Feseha Abebe-Akele; W Kelley Thomas; Kamal M Khalil; Louis S Tisa
Journal:  Genome Announc       Date:  2016-03-17

Review 2.  Host Matters: Medicinal Leech Digestive-Tract Symbionts and Their Pathogenic Potential.

Authors:  Jeremiah N Marden; Emily A McClure; Lidia Beka; Joerg Graf
Journal:  Front Microbiol       Date:  2016-10-13       Impact factor: 5.640

3.  Genome comparisons provide insights into the role of secondary metabolites in the pathogenic phase of the Photorhabdus life cycle.

Authors:  Nicholas J Tobias; Bagdevi Mishra; Deepak K Gupta; Rahul Sharma; Marco Thines; Timothy P Stinear; Helge B Bode
Journal:  BMC Genomics       Date:  2016-08-03       Impact factor: 3.969

4.  Permanent Draft Genome Sequence of Photorhabdus temperata Strain Hm, an Entomopathogenic Bacterium Isolated from Nematodes.

Authors:  Shimaa Ghazal; Erik Swanson; Stephen Simpson; Krystalynne Morris; Feseha Abebe-Akele; W Kelley Thomas; Kamal M Khalil; Louis S Tisa
Journal:  Genome Announc       Date:  2017-09-14

5.  Evaluation of the Antifungal Activities of Photorhabdus akhurstii and Its Secondary Metabolites against Phytopathogenic Colletotrichum gloeosporioides.

Authors:  Po-Wen Tu; Jie-Siang Chiu; Chih Lin; Chih-Cheng Chien; Feng-Chia Hsieh; Ming-Che Shih; Yu-Liang Yang
Journal:  J Fungi (Basel)       Date:  2022-04-15
  5 in total

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