Literature DB >> 25917057

Automated misspelling detection and correction in clinical free-text records.

Kenneth H Lai1, Maxim Topaz2, Foster R Goss3, Li Zhou4.   

Abstract

Accurate electronic health records are important for clinical care and research as well as ensuring patient safety. It is crucial for misspelled words to be corrected in order to ensure that medical records are interpreted correctly. This paper describes the development of a spelling correction system for medical text. Our spell checker is based on Shannon's noisy channel model, and uses an extensive dictionary compiled from many sources. We also use named entity recognition, so that names are not wrongly corrected as misspellings. We apply our spell checker to three different types of free-text data: clinical notes, allergy entries, and medication orders; and evaluate its performance on both misspelling detection and correction. Our spell checker achieves detection performance of up to 94.4% and correction accuracy of up to 88.2%. We show that high-performance spelling correction is possible on a variety of clinical documents.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Electronic health record; Named entity recognition; Natural language processing; Spelling correction

Mesh:

Year:  2015        PMID: 25917057     DOI: 10.1016/j.jbi.2015.04.008

Source DB:  PubMed          Journal:  J Biomed Inform        ISSN: 1532-0464            Impact factor:   6.317


  15 in total

1.  Extracting similar terms from multiple EMR-based semantic embeddings to support chart reviews.

Authors:  Cheng Ye; Daniel Fabbri
Journal:  J Biomed Inform       Date:  2018-05-22       Impact factor: 6.317

2.  Spell checker for consumer language (CSpell).

Authors:  Chris J Lu; Alan R Aronson; Sonya E Shooshan; Dina Demner-Fushman
Journal:  J Am Med Inform Assoc       Date:  2019-03-01       Impact factor: 4.497

3.  Automated Misspelling Detection and Correction in Persian Clinical Text.

Authors:  Azita Yazdani; Marjan Ghazisaeedi; Nasrin Ahmadinejad; Masoumeh Giti; Habibe Amjadi; Azin Nahvijou
Journal:  J Digit Imaging       Date:  2020-06       Impact factor: 4.056

4.  A value set for documenting adverse reactions in electronic health records.

Authors:  Foster R Goss; Kenneth H Lai; Maxim Topaz; Warren W Acker; Leigh Kowalski; Joseph M Plasek; Kimberly G Blumenthal; Diane L Seger; Sarah P Slight; Kin Wah Fung; Frank Y Chang; David W Bates; Li Zhou
Journal:  J Am Med Inform Assoc       Date:  2018-06-01       Impact factor: 4.497

5.  The UAB Informatics Institute and 2016 CEGS N-GRID de-identification shared task challenge.

Authors:  Duy Duc An Bui; Mathew Wyatt; James J Cimino
Journal:  J Biomed Inform       Date:  2017-05-03       Impact factor: 6.317

6.  Food entries in a large allergy data repository.

Authors:  Joseph M Plasek; Foster R Goss; Kenneth H Lai; Jason J Lau; Diane L Seger; Kimberly G Blumenthal; Paige G Wickner; Sarah P Slight; Frank Y Chang; Maxim Topaz; David W Bates; Li Zhou
Journal:  J Am Med Inform Assoc       Date:  2015-09-17       Impact factor: 4.497

7.  An unsupervised and customizable misspelling generator for mining noisy health-related text sources.

Authors:  Abeed Sarker; Graciela Gonzalez-Hernandez
Journal:  J Biomed Inform       Date:  2018-11-13       Impact factor: 6.317

8.  CAS: corpus of clinical cases in French.

Authors:  Natalia Grabar; Clément Dalloux; Vincent Claveau
Journal:  J Biomed Semantics       Date:  2020-08-06

9.  Modelling and extraction of variability in free-text medication prescriptions from an anonymised primary care electronic medical record research database.

Authors:  George Karystianis; Therese Sheppard; William G Dixon; Goran Nenadic
Journal:  BMC Med Inform Decis Mak       Date:  2016-02-09       Impact factor: 2.796

10.  Improving Allergy Documentation: A Retrospective Electronic Health Record System-Wide Patient Safety Initiative.

Authors:  Lily Li; Dinah Foer; Robert K Hallisey; Carol Hanson; Ashley E McKee; Gianna Zuccotti; Elizabeth A Mort; Thomas D Sequist; Nathan E Kaufman; Claire M Seguin; Allen Kachalia; Kimberly G Blumenthal; Paige G Wickner
Journal:  J Patient Saf       Date:  2022-01-01       Impact factor: 2.844

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