Literature DB >> 25916829

Talk among yourselves: RNA sponges mediate cross talk between functionally related messenger RNAs.

Muhammad S Azam1, Carin K Vanderpool1.   

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Year:  2015        PMID： 25916829      PMCID： PMC4474520          DOI： 10.15252/embj.201591492

Source DB:  PubMed          Journal:  EMBO J        ISSN： 0261-4189            Impact factor:   11.598


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  11 in total

1.  Global analysis of small RNA and mRNA targets of Hfq.

Authors:  Aixia Zhang; Karen M Wassarman; Carsten Rosenow; Brian C Tjaden; Gisela Storz; Susan Gottesman
Journal:  Mol Microbiol       Date:  2003-11       Impact factor: 3.501

Review 2.  miRNA sponges: soaking up miRNAs for regulation of gene expression.

Authors:  Rasmus O Bak; Jacob Giehm Mikkelsen
Journal:  Wiley Interdiscip Rev RNA       Date:  2013-12-23       Impact factor: 9.957

3.  A 3' external transcribed spacer in a tRNA transcript acts as a sponge for small RNAs to prevent transcriptional noise.

Authors:  David Lalaouna; Marie-Claude Carrier; Szabolcs Semsey; Jean-Simon Brouard; Jing Wang; Joseph T Wade; Eric Massé
Journal:  Mol Cell       Date:  2015-04-16       Impact factor: 17.970

Review 4.  Regulatory small RNAs from the 3' regions of bacterial mRNAs.

Authors:  Masatoshi Miyakoshi; Yanjie Chao; Jörg Vogel
Journal:  Curr Opin Microbiol       Date:  2015-02-09       Impact factor: 7.934

5.  Inhibition of ColE1 RNA primer formation by a plasmid-specified small RNA.

Authors:  J Tomizawa; T Itoh; G Selzer; T Som
Journal:  Proc Natl Acad Sci U S A       Date:  1981-03       Impact factor: 11.205

6.  Caught at its own game: regulatory small RNA inactivated by an inducible transcript mimicking its target.

Authors:  Nara Figueroa-Bossi; Martina Valentini; Laurette Malleret; Francesca Fiorini; Lionello Bossi
Journal:  Genes Dev       Date:  2009-07-28       Impact factor: 11.361

7.  An atlas of Hfq-bound transcripts reveals 3' UTRs as a genomic reservoir of regulatory small RNAs.

Authors:  Yanjie Chao; Kai Papenfort; Richard Reinhardt; Cynthia M Sharma; Jörg Vogel
Journal:  EMBO J       Date:  2012-08-24       Impact factor: 11.598

8.  The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium.

Authors:  Carsten Kröger; Shane C Dillon; Andrew D S Cameron; Kai Papenfort; Sathesh K Sivasankaran; Karsten Hokamp; Yanjie Chao; Alexandra Sittka; Magali Hébrard; Kristian Händler; Aoife Colgan; Pimlapas Leekitcharoenphon; Gemma C Langridge; Amanda J Lohan; Brendan Loftus; Sacha Lucchini; David W Ussery; Charles J Dorman; Nicholas R Thomson; Jörg Vogel; Jay C D Hinton
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-25       Impact factor: 11.205

9.  Cross talk between ABC transporter mRNAs via a target mRNA-derived sponge of the GcvB small RNA.

Authors:  Masatoshi Miyakoshi; Yanjie Chao; Jörg Vogel
Journal:  EMBO J       Date:  2015-01-28       Impact factor: 11.598

10.  Identification of bacteriophage-encoded anti-sRNAs in pathogenic Escherichia coli.

Authors:  Jai J Tree; Sander Granneman; Sean P McAteer; David Tollervey; David L Gally
Journal:  Mol Cell       Date:  2014-06-05       Impact factor: 17.970
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  5 in total

1.  Hfq CLASH uncovers sRNA-target interaction networks linked to nutrient availability adaptation.

Authors:  Ira Alexandra Iosub; Robert Willem van Nues; Stuart William McKellar; Karen Jule Nieken; Marta Marchioretto; Brandon Sy; Jai Justin Tree; Gabriella Viero; Sander Granneman
Journal:  Elife       Date:  2020-05-01       Impact factor: 8.140

2.  GRIL-seq provides a method for identifying direct targets of bacterial small regulatory RNA by in vivo proximity ligation.

Authors:  Kook Han; Brian Tjaden; Stephen Lory
Journal:  Nat Microbiol       Date:  2016-12-22       Impact factor: 17.745

3.  Functional expansion of a TCA cycle operon mRNA by a 3' end-derived small RNA.

Authors:  Masatoshi Miyakoshi; Gianluca Matera; Kanako Maki; Yasuhiro Sone; Jörg Vogel
Journal:  Nucleic Acids Res       Date:  2019-02-28       Impact factor: 16.971

Review 4.  Extracellular RNAs in Bacterial Infections: From Emerging Key Players on Host-Pathogen Interactions to Exploitable Biomarkers and Therapeutic Targets.

Authors:  Tiago Pita; Joana R Feliciano; Jorge H Leitão
Journal:  Int J Mol Sci       Date:  2020-12-17       Impact factor: 5.923

5.  Identification of an RNA sponge that controls the RoxS riboregulator of central metabolism in Bacillus subtilis.

Authors:  Sylvain Durand; Adam Callan-Sidat; Josie McKeown; Stephen Li; Gergana Kostova; Juan R Hernandez-Fernaud; Mohammad Tauqeer Alam; Andrew Millard; Delphine Allouche; Chrystala Constantinidou; Ciarán Condon; Emma L Denham
Journal:  Nucleic Acids Res       Date:  2021-06-21       Impact factor: 16.971
  5 in total

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