Literature DB >> 25901412

Single Cell GFP-Trap Reveals Stoichiometry and Dynamics of Cytosolic Protein Complexes.

Tim Wedeking1, Sara Löchte1, Christian P Richter1, Maniraj Bhagawati1, Jacob Piehler1, Changjiang You1.   

Abstract

We developed in situ single cell pull-down (SiCPull) of GFP-tagged protein complexes based on micropatterned functionalized surface architectures. Cells cultured on these supports are lysed by mild detergents and protein complexes captured to the surface are probed in situ by total internal reflection fluorescence microscopy. Using SiCPull, we quantitatively mapped the lifetimes of various signal transducer and activator of transcription complexes by monitoring dissociation from the surface and defined their stoichiometry on the single molecule level.

Keywords:  Protein−protein interaction; functional surface micropatterning; nanobody; signal transducer and activator of transcription; single molecule imaging

Mesh:

Substances:

Year:  2015        PMID: 25901412     DOI: 10.1021/acs.nanolett.5b01153

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  12 in total

1.  Monitoring Changes in the Oligomeric State of a Candidate Endoplasmic Reticulum (ER) Ceramide Sensor by Single-molecule Photobleaching.

Authors:  Birol Cabukusta; Jan A Köhlen; Christian P Richter; Changjiang You; Joost C M Holthuis
Journal:  J Biol Chem       Date:  2016-10-10       Impact factor: 5.157

2.  Nanoscopic anatomy of dynamic multi-protein complexes at membranes resolved by graphene-induced energy transfer.

Authors:  Nadia Füllbrunn; Zehao Li; Lara Jorde; Christian P Richter; Rainer Kurre; Lars Langemeyer; Changyuan Yu; Carola Meyer; Jörg Enderlein; Christian Ungermann; Jacob Piehler; Changjiang You
Journal:  Elife       Date:  2021-01-29       Impact factor: 8.140

3.  Facile single-molecule pull-down assay for analysis of endogenous proteins.

Authors:  Benjamin Croop; Kyu Young Han
Journal:  Phys Biol       Date:  2019-03-22       Impact factor: 2.959

4.  Generalized recovery algorithm for 3D super-resolution microscopy using rotating point spread functions.

Authors:  Bo Shuang; Wenxiao Wang; Hao Shen; Lawrence J Tauzin; Charlotte Flatebo; Jianbo Chen; Nicholas A Moringo; Logan D C Bishop; Kevin F Kelly; Christy F Landes
Journal:  Sci Rep       Date:  2016-08-04       Impact factor: 4.379

5.  Mechanism of SOS PR-domain autoinhibition revealed by single-molecule assays on native protein from lysate.

Authors:  Young Kwang Lee; Shalini T Low-Nam; Jean K Chung; Scott D Hansen; Hiu Yue Monatrice Lam; Steven Alvarez; Jay T Groves
Journal:  Nat Commun       Date:  2017-04-28       Impact factor: 14.919

6.  Single-molecule imaging reveals dynamic biphasic partition of RNA-binding proteins in stress granules.

Authors:  Benedikt Niewidok; Maxim Igaev; Abel Pereira da Graca; Andre Strassner; Christine Lenzen; Christian P Richter; Jacob Piehler; Rainer Kurre; Roland Brandt
Journal:  J Cell Biol       Date:  2018-02-20       Impact factor: 10.539

7.  A novel extended form of alpha-synuclein 3'UTR in the human brain.

Authors:  Goun Je; Subhrangshu Guhathakurta; Seung Pil Yun; Han Seok Ko; Yoon-Seong Kim
Journal:  Mol Brain       Date:  2018-05-25       Impact factor: 4.041

8.  The structure-energy landscape of NMDA receptor gating.

Authors:  Drew M Dolino; Sudeshna Chatterjee; David M MacLean; Charlotte Flatebo; Logan D C Bishop; Sana A Shaikh; Christy F Landes; Vasanthi Jayaraman
Journal:  Nat Chem Biol       Date:  2017-10-09       Impact factor: 15.040

9.  Surrogate Wnt agonists that phenocopy canonical Wnt and β-catenin signalling.

Authors:  Claudia Y Janda; Luke T Dang; Changjiang You; Junlei Chang; Wim de Lau; Zhendong A Zhong; Kelley S Yan; Owen Marecic; Dirk Siepe; Xingnan Li; James D Moody; Bart O Williams; Hans Clevers; Jacob Piehler; David Baker; Calvin J Kuo; K Christopher Garcia
Journal:  Nature       Date:  2017-05-03       Impact factor: 69.504

10.  Self-assembly of robust gold nanoparticle monolayer architectures for quantitative protein interaction analysis by LSPR spectroscopy.

Authors:  Julia Flesch; Marie Kappen; Christoph Drees; Changjiang You; Jacob Piehler
Journal:  Anal Bioanal Chem       Date:  2020-03-21       Impact factor: 4.142

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