Literature DB >> 25898187

A vision and a prescription for big data-enabled medicine.

Damien Chaussabel1, Bali Pulendran2.   

Abstract

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Year:  2015        PMID： 25898187     DOI： 10.1038/ni.3151

Source DB:  PubMed          Journal:  Nat Immunol        ISSN： 1529-2908            Impact factor:   25.606


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  34 in total

1.  Common and divergent immune response signaling pathways discovered in peripheral blood mononuclear cell gene expression patterns in presymptomatic and clinically apparent malaria.

Authors:  Christian F Ockenhouse; Wan-chung Hu; Kent E Kester; James F Cummings; Ann Stewart; D Gray Heppner; Anne E Jedlicka; Alan L Scott; Nathan D Wolfe; Maryanne Vahey; Donald S Burke
Journal:  Infect Immun       Date:  2006-10       Impact factor: 3.441

Review 2.  How the study of children with rheumatic diseases identified interferon-alpha and interleukin-1 as novel therapeutic targets.

Authors:  Virginia Pascual; Florence Allantaz; Pinakeen Patel; A Karolina Palucka; Damien Chaussabel; Jacques Banchereau
Journal:  Immunol Rev       Date:  2008-06       Impact factor: 12.988

3.  A modular analysis framework for blood genomics studies: application to systemic lupus erythematosus.

Authors:  Damien Chaussabel; Charles Quinn; Jing Shen; Pinakeen Patel; Casey Glaser; Nicole Baldwin; Dorothee Stichweh; Derek Blankenship; Lei Li; Indira Munagala; Lynda Bennett; Florence Allantaz; Asuncion Mejias; Monica Ardura; Ellen Kaizer; Laurence Monnet; Windy Allman; Henry Randall; Diane Johnson; Aimee Lanier; Marilynn Punaro; Knut M Wittkowski; Perrin White; Joseph Fay; Goran Klintmalm; Octavio Ramilo; A Karolina Palucka; Jacques Banchereau; Virginia Pascual
Journal:  Immunity       Date:  2008-07-18       Impact factor: 31.745

4.  An interferon-inducible neutrophil-driven blood transcriptional signature in human tuberculosis.

Authors:  Matthew P R Berry; Christine M Graham; Finlay W McNab; Zhaohui Xu; Susannah A A Bloch; Tolu Oni; Katalin A Wilkinson; Romain Banchereau; Jason Skinner; Robert J Wilkinson; Charles Quinn; Derek Blankenship; Ranju Dhawan; John J Cush; Asuncion Mejias; Octavio Ramilo; Onn M Kon; Virginia Pascual; Jacques Banchereau; Damien Chaussabel; Anne O'Garra
Journal:  Nature       Date:  2010-08-19       Impact factor: 49.962

5.  Systems biology of vaccination for seasonal influenza in humans.

Authors:  Helder I Nakaya; Jens Wrammert; Eva K Lee; Luigi Racioppi; Stephanie Marie-Kunze; W Nicholas Haining; Anthony R Means; Sudhir P Kasturi; Nooruddin Khan; Gui-Mei Li; Megan McCausland; Vibhu Kanchan; Kenneth E Kokko; Shuzhao Li; Rivka Elbein; Aneesh K Mehta; Alan Aderem; Kanta Subbarao; Rafi Ahmed; Bali Pulendran
Journal:  Nat Immunol       Date:  2011-07-10       Impact factor: 25.606

6.  Blood signature of pre-heart failure: a microarrays study.

Authors:  Fatima Smih; Franck Desmoulin; Matthieu Berry; Annie Turkieh; Romain Harmancey; Jason Iacovoni; Charlotte Trouillet; Clement Delmas; Atul Pathak; Olivier Lairez; François Koukoui; Pierre Massabuau; Jean Ferrieres; Michel Galinier; Philippe Rouet
Journal:  PLoS One       Date:  2011-06-24       Impact factor: 3.240

7.  Molecular signatures of antibody responses derived from a systems biology study of five human vaccines.

Authors:  Shuzhao Li; Nadine Rouphael; Sai Duraisingham; Sandra Romero-Steiner; Scott Presnell; Carl Davis; Daniel S Schmidt; Scott E Johnson; Andrea Milton; Gowrisankar Rajam; Sudhir Kasturi; George M Carlone; Charlie Quinn; Damien Chaussabel; A Karolina Palucka; Mark J Mulligan; Rafi Ahmed; David S Stephens; Helder I Nakaya; Bali Pulendran
Journal:  Nat Immunol       Date:  2013-12-15       Impact factor: 25.606

8.  Sequences and consequences.

Authors:  Sydney Brenner
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-01-12       Impact factor: 6.237

9.  Interferon and granulopoiesis signatures in systemic lupus erythematosus blood.

Authors:  Lynda Bennett; A Karolina Palucka; Edsel Arce; Victoria Cantrell; Josef Borvak; Jacques Banchereau; Virginia Pascual
Journal:  J Exp Med       Date:  2003-03-17       Impact factor: 14.307

10.  Whole blood gene expression profiles to assess pathogenesis and disease severity in infants with respiratory syncytial virus infection.

Authors:  Asuncion Mejias; Blerta Dimo; Nicolas M Suarez; Carla Garcia; M Carmen Suarez-Arrabal; Tuomas Jartti; Derek Blankenship; Alejandro Jordan-Villegas; Monica I Ardura; Zhaohui Xu; Jacques Banchereau; Damien Chaussabel; Octavio Ramilo
Journal:  PLoS Med       Date:  2013-11-12       Impact factor: 11.069
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  13 in total

Review 1.  Biomarkers for posttransplantation outcomes.

Authors:  Sophie Paczesny
Journal:  Blood       Date:  2018-04-05       Impact factor: 22.113

2.  Bioinformatics for immunologists.

Authors:  Daniel M Altmann
Journal:  Immunology       Date:  2018-09       Impact factor: 7.397

Review 3.  Post-haematopoietic cell transplantation outcomes: why ST2 became a 'golden nugget' biomarker.

Authors:  Sophie Paczesny
Journal:  Br J Haematol       Date:  2020-02-10       Impact factor: 6.998

4.  How Will Big Data Improve Clinical and Basic Research in Radiation Therapy?

Authors:  Barry S Rosenstein; Jacek Capala; Jason A Efstathiou; Jeff Hammerbacher; Sarah L Kerns; Feng-Ming Spring Kong; Harry Ostrer; Fred W Prior; Bhadrasain Vikram; John Wong; Ying Xiao
Journal:  Int J Radiat Oncol Biol Phys       Date:  2015-11-11       Impact factor: 7.038

5.  Blood Transcriptional Biomarkers for Active Tuberculosis among Patients in the United States: a Case-Control Study with Systematic Cross-Classifier Evaluation.

Authors:  Nicholas D Walter; Mikaela A Miller; Joshua Vasquez; Marc Weiner; Adam Chapman; Melissa Engle; Michael Higgins; Amy M Quinones; Vanessa Rosselli; Elizabeth Canono; Christina Yoon; Adithya Cattamanchi; J Lucian Davis; Tzu Phang; Robert S Stearman; Gargi Datta; Benjamin J Garcia; Charles L Daley; Michael Strong; Katerina Kechris; Tasha E Fingerlin; Randall Reves; Mark W Geraci
Journal:  J Clin Microbiol       Date:  2015-11-18       Impact factor: 5.948

Review 6.  Neuroinflammation - using big data to inform clinical practice.

Authors:  Calliope A Dendrou; Gil McVean; Lars Fugger
Journal:  Nat Rev Neurol       Date:  2016-11-18       Impact factor: 42.937

7.  Finger stick blood collection for gene expression profiling and storage of tempus blood RNA tubes.

Authors:  Darawan Rinchai; Esperanza Anguiano; Phuong Nguyen; Damien Chaussabel
Journal:  F1000Res       Date:  2016-06-15

8.  Examining Users' Adoption of Precision Medicine: The Moderating Role of Medical Technical Knowledge.

Authors:  Xingyuan Wang; Yun Liu; Hongchen Liu
Journal:  Int J Environ Res Public Health       Date:  2020-02-10       Impact factor: 3.390

9.  Integrated transcriptional-phenotypic analysis captures systemic immunomodulation following antiangiogenic therapy in renal cell carcinoma patients.

Authors:  Darawan Rinchai; Elena Verzoni; Veronica Huber; Agata Cova; Paola Squarcina; Loris De Cecco; Filippo de Braud; Raffaele Ratta; Matteo Dugo; Luca Lalli; Viviana Vallacchi; Monica Rodolfo; Jessica Roelands; Chiara Castelli; Damien Chaussabel; Giuseppe Procopio; Davide Bedognetti; Licia Rivoltini
Journal:  Clin Transl Med       Date:  2021-06

Review 10.  Big Data in traumatic brain injury; promise and challenges.

Authors:  Denes V Agoston; Dianne Langford
Journal:  Concussion       Date:  2017-07-10
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