Literature DB >> 25896808

Compound mouse mutants of bZIP transcription factors Mafg and Mafk reveal a regulatory network of non-crystallin genes associated with cataract.

Smriti A Agrawal1, Deepti Anand, Archana D Siddam, Atul Kakrana, Soma Dash, David A Scheiblin, Christine A Dang, Anne M Terrell, Stephanie M Waters, Abhyudai Singh, Hozumi Motohashi, Masayuki Yamamoto, Salil A Lachke.   

Abstract

Although majority of the genes linked to early-onset cataract exhibit lens fiber cell-enriched expression, our understanding of gene regulation in these cells is limited to function of just eight transcription factors and largely in the context of crystallins. We report on small Maf transcription factors Mafg and Mafk as regulators of several non-crystallin human cataract-associated genes in fiber cells and establish their significance to this disease. We applied a bioinformatics tool for cataract gene discovery iSyTE to identify Mafg and its co-regulators in the lens, and generated various null-allelic combinations of Mafg:Mafk mouse mutants for phenotypic and molecular analysis. By age 4 months, Mafg-/-:Mafk+/- mutants exhibit lens defects that progressively develop into cataract. High-resolution phenotypic characterization of Mafg-/-:Mafk+/- mouse lens reveals severely disorganized fiber cells, while microarray-based expression profiling identifies 97 differentially regulated genes (DRGs). Integrative analysis of Mafg-/-:Mafk+/- lens-DRGs with (1) binding motifs and genomic targets of small Mafs and their regulatory partners, (2) iSyTE lens expression data, and (3) interactions between DRGs in the String database, unravel a detailed small Maf regulatory network in the lens, several nodes of which are linked to cataract. This approach identifies 36 high-priority candidates from the original 97 DRGs. Significantly, 8/36 (22%) DRGs are associated with cataracts in human (GSTO1, MGST1, SC4MOL, UCHL1) or mouse (Aldh3a1, Crygf, Hspb1, Pcbd1), suggesting a multifactorial etiology that includes oxidative stress and misregulation of sterol synthesis. These data identify Mafg and Mafk as new cataract-associated candidates and define their function in regulating largely non-crystallin genes linked to human cataract.

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Year:  2015        PMID: 25896808      PMCID: PMC4486474          DOI: 10.1007/s00439-015-1554-5

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  80 in total

1.  An immunohistochemical method for the detection of proteins in the vertebrate lens.

Authors:  N A Reed; D J Oh; K J Czymmek; M K Duncan
Journal:  J Immunol Methods       Date:  2001-07-01       Impact factor: 2.303

2.  EphA2 and Src regulate equatorial cell morphogenesis during lens development.

Authors:  Catherine Cheng; Moham M Ansari; Jonathan A Cooper; Xiaohua Gong
Journal:  Development       Date:  2013-09-11       Impact factor: 6.868

3.  Beta-1 integrin is important for the structural maintenance and homeostasis of differentiating fiber cells.

Authors:  David A Scheiblin; Junyuan Gao; Jeffrey L Caplan; Vladimir N Simirskii; Kirk J Czymmek; Richard T Mathias; Melinda K Duncan
Journal:  Int J Biochem Cell Biol       Date:  2014-03-04       Impact factor: 5.085

4.  Alpha-B crystallin gene (CRYAB) mutation causes dominant congenital posterior polar cataract in humans.

Authors:  V Berry; P Francis; M A Reddy; D Collyer; E Vithana; I MacKay; G Dawson; A H Carey; A Moore; S S Bhattacharya; R A Quinlan
Journal:  Am J Hum Genet       Date:  2001-09-27       Impact factor: 11.025

Review 5.  Clinical and experimental advances in congenital and paediatric cataracts.

Authors:  Amanda Churchill; Jochen Graw
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-04-27       Impact factor: 6.237

6.  ALDH1A3 loss of function causes bilateral anophthalmia/microphthalmia and hypoplasia of the optic nerve and optic chiasm.

Authors:  Mani Yahyavi; Hana Abouzeid; Ghada Gawdat; Anne-Sophie de Preux; Tong Xiao; Tanya Bardakjian; Adele Schneider; Alex Choi; Eric Jorgenson; Herwig Baier; Mohamad El Sada; Daniel F Schorderet; Anne M Slavotinek
Journal:  Hum Mol Genet       Date:  2013-04-15       Impact factor: 6.150

Review 7.  Genetics of human cataract.

Authors:  A Shiels; J F Hejtmancik
Journal:  Clin Genet       Date:  2013-06-10       Impact factor: 4.438

8.  Domain disruption and mutation of the bZIP transcription factor, MAF, associated with cataract, ocular anterior segment dysgenesis and coloboma.

Authors:  Robyn V Jamieson; Rahat Perveen; Bronwyn Kerr; Martin Carette; Jill Yardley; Elise Heon; M Gabriela Wirth; Veronica van Heyningen; Di Donnai; Francis Munier; Graeme C M Black
Journal:  Hum Mol Genet       Date:  2002-01-01       Impact factor: 6.150

9.  Quantitative analysis of SOD2, ALDH1A1 and MGST1 messenger ribonucleic acid in anterior lens epithelium of patients with pseudoexfoliation syndrome.

Authors:  Barbara Strzalka-Mrozik; Lilianna Prudlo; Malgorzata W Kimsa; Magdalena C Kimsa; Malgorzata Kapral; Malgorzata Nita; Urszula Mazurek
Journal:  Mol Vis       Date:  2013-06-12       Impact factor: 2.367

10.  ABCC5, a gene that influences the anterior chamber depth, is associated with primary angle closure glaucoma.

Authors:  Monisha E Nongpiur; Chiea Chuen Khor; Hongyan Jia; Belinda K Cornes; Li-Jia Chen; Chunyan Qiao; K Saidas Nair; Ching-Yu Cheng; Liang Xu; Ronnie George; Do Tan; Khaled Abu-Amero; Shamira A Perera; Mineo Ozaki; Takanori Mizoguchi; Yasuo Kurimoto; Sancy Low; Liza-Sharmini A Tajudin; Ching-Lin Ho; Clement C Y Tham; Ileana Soto; Paul T K Chew; Hon-Tym Wong; Balekudaru Shantha; Masako Kuroda; Essam A Osman; Guangxian Tang; Sujie Fan; Hailin Meng; Hua Wang; Bo Feng; Victor H K Yong; Serena M L Ting; Yang Li; Ya-Xing Wang; Zheng Li; Raghavan Lavanya; Ren-Yi Wu; Ying-Feng Zheng; Daniel H Su; Seng-Chee Loon; Vernon K Y Yong; R Rand Allingham; Michael A Hauser; Nagaswamy Soumittra; Vedam L Ramprasad; Naushin Waseem; Azhany Yaakub; Kee-Seng Chia; Govindasamy Kumaramanickavel; Tina T Wong; Alicia C How; Tran Nguyen Bich Chau; Cameron P Simmons; Jin-Xin Bei; Yi-Xin Zeng; Shomi S Bhattacharya; Mingzhi Zhang; Donald T Tan; Yik-Ying Teo; Saleh A Al-Obeidan; Do Nhu Hon; E-Shyong Tai; Seang-Mei Saw; Paul J Foster; Lingam Vijaya; Jost B Jonas; Tien-Yin Wong; Simon W M John; Chi-Pui Pang; Eranga N Vithana; Ningli Wang; Tin Aung
Journal:  PLoS Genet       Date:  2014-03-06       Impact factor: 5.917

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  29 in total

1.  Deficiency of the RNA binding protein caprin2 causes lens defects and features of Peters anomaly.

Authors:  Soma Dash; Christine A Dang; David C Beebe; Salil A Lachke
Journal:  Dev Dyn       Date:  2015-08-07       Impact factor: 3.780

Review 2.  Small Maf proteins (MafF, MafG, MafK): History, structure and function.

Authors:  Fumiki Katsuoka; Masayuki Yamamoto
Journal:  Gene       Date:  2016-04-05       Impact factor: 3.688

3.  The cataract-linked RNA-binding protein Celf1 post-transcriptionally controls the spatiotemporal expression of the key homeodomain transcription factors Pax6 and Prox1 in lens development.

Authors:  Sandeep Aryal; Justine Viet; Bailey A T Weatherbee; Archana D Siddam; Francisco G Hernandez; Carole Gautier-Courteille; Luc Paillard; Salil A Lachke
Journal:  Hum Genet       Date:  2020-06-27       Impact factor: 4.132

4.  RNA sequencing-based transcriptomic profiles of embryonic lens development for cataract gene discovery.

Authors:  Deepti Anand; Atul Kakrana; Archana D Siddam; Hongzhan Huang; Irfan Saadi; Salil A Lachke
Journal:  Hum Genet       Date:  2018-11-11       Impact factor: 4.132

5.  Molecular characterization of the human lens epithelium-derived cell line SRA01/04.

Authors:  Bailey A T Weatherbee; Joshua R Barton; Archana D Siddam; Deepti Anand; Salil A Lachke
Journal:  Exp Eye Res       Date:  2019-08-31       Impact factor: 3.467

6.  Novel phenotypes and loci identified through clinical genomics approaches to pediatric cataract.

Authors:  Nisha Patel; Deepti Anand; Dorota Monies; Sateesh Maddirevula; Arif O Khan; Talal Algoufi; Mohammed Alowain; Eissa Faqeih; Muneera Alshammari; Ahmed Qudair; Hadeel Alsharif; Fatimah Aljubran; Hessa S Alsaif; Niema Ibrahim; Firdous M Abdulwahab; Mais Hashem; Haifa Alsedairy; Mohammed A Aldahmesh; Salil A Lachke; Fowzan S Alkuraya
Journal:  Hum Genet       Date:  2016-11-22       Impact factor: 4.132

Review 7.  Mutation update of transcription factor genes FOXE3, HSF4, MAF, and PITX3 causing cataracts and other developmental ocular defects.

Authors:  Deepti Anand; Smriti A Agrawal; Anne Slavotinek; Salil A Lachke
Journal:  Hum Mutat       Date:  2018-01-16       Impact factor: 4.878

Review 8.  Signaling and Gene Regulatory Networks in Mammalian Lens Development.

Authors:  Ales Cvekl; Xin Zhang
Journal:  Trends Genet       Date:  2017-08-31       Impact factor: 11.639

Review 9.  RNA-binding proteins in eye development and disease: implication of conserved RNA granule components.

Authors:  Soma Dash; Archana D Siddam; Carrie E Barnum; Sarath Chandra Janga; Salil A Lachke
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-05-01       Impact factor: 9.957

Review 10.  Systems biology of lens development: A paradigm for disease gene discovery in the eye.

Authors:  Deepti Anand; Salil A Lachke
Journal:  Exp Eye Res       Date:  2016-03-16       Impact factor: 3.467

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