Literature DB >> 25892118

RNase II: A new player enters the game.

Qingfeng Zhang1, Artur Scherf.   

Abstract

Malaria is caused by a unicellular protozoan pathogen of the genus Plasmodium. Although genes represent monocistronic units that are expressed in a life cycle stage-specific manner, post-transcriptional regulation via translational repression of mRNA has been observed in parasite stages that transition from the vertebrate host to the Anopheles vector. An interesting new type of post-transcriptional control was recently discovered in Plasmodium falciparum stages that infect human erythrocytes. A subgroup of genes that were thought to be transcriptionally silent are actually transcribed but degraded immediately by an RNase II that is recruited to these gene loci. This cryptic RNA is not detectable in steady-state RNA but has been detected using nuclear run-on techniques and in mutant RNase II parasites. Nascent RNA degradation controls virulence genes expressed in a monoallelic fashion and noncoding RNAs (ncRNAs), but also a number of housekeeping-like of genes. More studies on other life cycle stages may reveal the full extent of this type of gene regulation in malaria parasites. It is tempting to speculate that RNase II-mediated gene control may exist in other eukaryotic organisms.

Entities:  

Keywords:  exoribonuclease II; malaria; monoallelic expression; nascent RNA degradation

Mesh:

Substances:

Year:  2015        PMID: 25892118      PMCID: PMC4615643          DOI: 10.1080/15476286.2015.1038013

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  21 in total

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Authors:  Artur Scherf; Jose Juan Lopez-Rubio; Loïc Riviere
Journal:  Annu Rev Microbiol       Date:  2008       Impact factor: 15.500

2.  Parasite physiology: RNase silences Plasmodium antigens.

Authors:  Christina Tobin Kåhrström
Journal:  Nat Rev Microbiol       Date:  2014-07-07       Impact factor: 60.633

3.  Transcription is initiated on silent variant surface glycoprotein expression sites despite monoallelic expression in Trypanosoma brucei.

Authors:  Ali Kassem; Etienne Pays; Luc Vanhamme
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-02       Impact factor: 11.205

4.  Exonuclease-mediated degradation of nascent RNA silences genes linked to severe malaria.

Authors:  Qingfeng Zhang; T Nicolai Siegel; Rafael M Martins; Fei Wang; Jun Cao; Qi Gao; Xiu Cheng; Lubin Jiang; Chung-Chau Hon; Christine Scheidig-Benatar; Hiroshi Sakamoto; Louise Turner; Anja T R Jensen; Aurelie Claes; Julien Guizetti; Nicholas A Malmquist; Artur Scherf
Journal:  Nature       Date:  2014-06-29       Impact factor: 49.962

5.  Genome-wide analysis of heterochromatin associates clonally variant gene regulation with perinuclear repressive centers in malaria parasites.

Authors:  Jose-Juan Lopez-Rubio; Liliana Mancio-Silva; Artur Scherf
Journal:  Cell Host Microbe       Date:  2009-02-19       Impact factor: 21.023

6.  Specific DNA-binding by apicomplexan AP2 transcription factors.

Authors:  Erandi K De Silva; Andrew R Gehrke; Kellen Olszewski; Ilsa León; Jasdave S Chahal; Martha L Bulyk; Manuel Llinás
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-09       Impact factor: 11.205

7.  The transcriptome of the intraerythrocytic developmental cycle of Plasmodium falciparum.

Authors:  Zbynek Bozdech; Manuel Llinás; Brian Lee Pulliam; Edith D Wong; Jingchun Zhu; Joseph L DeRisi
Journal:  PLoS Biol       Date:  2003-08-18       Impact factor: 8.029

Review 8.  Noncoding RNAs as emerging regulators of Plasmodium falciparum virulence gene expression.

Authors:  Shruthi S Vembar; Artur Scherf; T Nicolai Siegel
Journal:  Curr Opin Microbiol       Date:  2014-07-12       Impact factor: 7.934

9.  Genome-wide analysis in Plasmodium falciparum reveals early and late phases of RNA polymerase II occupancy during the infectious cycle.

Authors:  Ragini Rai; Lei Zhu; Haifen Chen; Archana Patkar Gupta; Siu Kwan Sze; Jie Zheng; Christiane Ruedl; Zbynek Bozdech; Mark Featherstone
Journal:  BMC Genomics       Date:  2014-11-06       Impact factor: 3.969

10.  A proteomic view of the Plasmodium falciparum life cycle.

Authors:  Laurence Florens; Michael P Washburn; J Dale Raine; Robert M Anthony; Munira Grainger; J David Haynes; J Kathleen Moch; Nemone Muster; John B Sacci; David L Tabb; Adam A Witney; Dirk Wolters; Yimin Wu; Malcolm J Gardner; Anthony A Holder; Robert E Sinden; John R Yates; Daniel J Carucci
Journal:  Nature       Date:  2002-10-03       Impact factor: 49.962

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  1 in total

1.  Characterization of the Catalytic Subunits of the RNA Exosome-like Complex in Plasmodium falciparum.

Authors:  Ning Jiang; Shengchao Yu; Na Yang; Ying Feng; Xiaoyu Sang; Yao Wang; Mats Wahlgren; Qijun Chen
Journal:  J Eukaryot Microbiol       Date:  2018-05-07       Impact factor: 3.346

  1 in total

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