| Literature DB >> 25888827 |
Abbey Olsen1, Klaas Frankena2, Rene' Bødker3, Nils Toft4, Stig M Thamsborg5, Heidi L Enemark6, Tariq Halasa7.
Abstract
BACKGROUND: Fasciola hepatica, a trematode parasite (liver fluke), infects a wide range of host species causing fasciolosis. The disease is prevalent world-wide and causes considerable economic losses to the livestock industry. Fasciolosis is regarded as an emerging food-borne zoonosis. To promote awareness among farmers and to implement strategies to control the infection, this study examined the prevalence, spatial distribution and risk factors for F. hepatica infection in Danish cattle herds.Entities:
Mesh:
Year: 2015 PMID: 25888827 PMCID: PMC4374337 DOI: 10.1186/s13071-015-0773-x
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Information on the datasets and the variables considered for creating the final dataset for a study on infection in Danish cattle herds
|
|
|
|
|
|---|---|---|---|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
1Non-dairy herds = Includes large and small beef herds, heifer raising herds, large and small veal production herds.
2Herd size = Total number of bulls below 6 months of age + number of bulls above 6 months of age + total number of heifers below 6 months of age + total number of heifers above 6 months + total number of cows.
3Environmental variables = Located within 500 square meters around each farm; source: CORINE database (2000).
4Unknown = Status of the herd from which the animal was purchased is not known and or included herds that did not trade with other herds.
Figure 1Diagram showing how the final dataset was created through extraction of variables and merging of data from the two master databases, the Danish Cattle Database and the CORINE vector database.
Descriptive characteristics of herds (n = 16,626) and percentage tested positive for infection, as determined at meat inspection (years 2011–2013) in Danish abattoirs
|
|
| ||||
|---|---|---|---|---|---|
|
|
|
|
|
|
|
|
|
|
|
| ||
| Trade | No | 215 (34.9) | 5,321 (27.7) | 331 (47.1) | 5,205 (26.7) |
| Yes | 652 (59.7) | 10,438 (46.9) | 3,971 (58.9) | 7,119 (41.4) | |
| Pastures | Absent | 810 (52.6) | 14,832 (39.5) | 4,012 (57.1) | 11,630 (34.4) |
| Present | 57 (66.7) | 927 (54.6) | 290 (69.7) | 694 (49.3) | |
| Wetlands | Absent | 504 (51.6) | 9,555 (37.7) | 2,696 (55.2) | 7,363 (32.2) |
| Present | 363 (56.2) | 6,204 (44.7) | 1,606 (62.7) | 4,961 (39.7) | |
| Streams | Absent | 580 (51.7) | 11,277 (39.0) | 3,030 (56.9) | 8,827 (33.7) |
| Present | 287 (57.1) | 4,482 (44.1) | 1,272 (60.5) | 3,497 (39.2) | |
| Dry-land | Absent | 323 (53.6) | 5,741 (38.6) | 1,701 (57.9) | 4,363 (32.3) |
| Present | 544 (53.5) | 10,018 (41.5) | 2,601 (58.1) | 7,961 (36.9) | |
| Crop-land | Absent | 4 (50.0) | 40 (35.0) | 1 (100.0) | 43 (34.9) |
| Present | 863 (53.5) | 15,719 (40.4) | 4,301 (58.00) | 12,281 (35.2) | |
1Includes large and small beef herds, heifer raising herds, large and small veal production herds.
Figure 2Heat maps of observed (a) and predicted (b) status of infection in Danish cattle herds (n = 16,626) where areas coloured in red and blue indicate hot (RR ≥ 1.0) and cold spots (RR < 1.0), respectively. The insert in Figure 2 a shows a SatScan map of significant spatial local clustering of infected (red) and non-infected (blue) herds.
Herd and environmental factors associated with the presence of infection in Danish bovine herds (n = 16,626) as diagnosed by meat inspection (2011 to 2013), in the final logistic regression model
|
|
|
|
|
|
|---|---|---|---|---|
| Intercept | −0.95 (0.41)b | |||
| Farm-type | Conventional | 15,759 | 40.43 | −0.18 (0.14) |
| Organic | 867 | 53.52 | ref | |
| Production-type | Non-dairy2 | 12,324 | 35.22 | 0.21 (0.14) |
| Dairy | 4,302 | 58 | reference | |
| Distance to the nearest fluke positive herd3 | −0.19 (0.02)a | |||
| Slaughterhouse | A | 1,862 | 42.16 | 0.58 (0.07)a |
| B | 2,669 | 56.13 | 1.21 (0.06)a | |
| C | 2,006 | 47.51 | 0.66 (0.07)a | |
| D | 2,378 | 40.92 | 0.44 (0.07)a | |
| E | 725 | 50.07 | 0.91 (0.09)a | |
| F | 1,025 | 41.76 | 1.03 (0.08)a | |
| G | 575 | 40.17 | 0.62 (0.10)a | |
| H | 1,460 | 62.12 | 1.53 (0.07)a | |
| Other | 3,926 | 17.75 | reference | |
| Streams | Present | 4,769 | 44.87 | 0.16 (0.04)a |
| Absent | 11,857 | 39.6 | reference | |
| Wetlands | Present | 6,567 | 45.29 | 0.31 (0.04)a |
| Absent | 10,059 | 38.38 | reference | |
| Cropland | Present | 16,582 | 41.12 | −0.88 (0.36)b |
| Absent | 44 | 36.36 | ref | |
| Pastures | Present | 984 | 55.28 | 0.38 (0.07)a |
| Absent | 15,642 | 40.22 | reference | |
| Dry-land | Present | 10,562 | 42.08 | −0.08 (0.04)b |
| Absent | 6,064 | 39.43 | reference | |
| Herd-size | Small (<30) | 9,028 | 26.09 | reference |
| Medium (≥30 to < 100) | 3,200 | 53.41 | 1.17 (0.27)b | |
| Large (≥100) | 4,398 | 63.01 | 1.92 (0.23)b | |
| BuyInfYN4 | Yes | 1,659 | 61.18 | 0.68 (0.25)b |
| Unknown | 3,106 | 55.02 | −0.15 (0.21)b | |
| No | 11,861 | 34.66 | reference | |
| Farm-type*BuyInfYN | Conventional*Yes | 1,547 | 60.31 | 0.09 (0.26) |
| Conventional*Unknown | 2,962 | 54.90 | 0.65 (0.22)a | |
| Conventional*No | 11,250 | 33.88 | reference | |
| Farm-type*Herd-size | Conventional*Small | 8,726 | 26,08 | reference |
| Conventional*Medium | 3,045 | 52.97 | −0.56 (0.23)b | |
| Conventional*Large | 3,988 | 62.24 | −0.48 (0.19)a | |
| Production-type*Herd-size | Non-dairy*Small | 8,760 | 26.03 | reference |
| Non-dairy*Medium | 2,640 | 55.72 | 0.42 (0.17)a | |
| Non-dairy*Large | 924 | 63.85 | −0.06 (0.17) |
1Number of herds per category.
2Includes large and small beef herds, heifer raising herds, large and small veal production herds.
3Distance in km, mean = 1.28, median = 1.05, 5th percentile = 0.26, 95th percentile = 3.06 km.
4Trade with infected herds (Yes, No, Unknown) where Unknown represented herds with unknown infection status.
a,bP-value ≤ 0.01 and ≤ 0.05, respectively.