Literature DB >> 25888177

Gene Deletions Resulting in Increased Nitrogen Release by Azotobacter vinelandii: Application of a Novel Nitrogen Biosensor.

Brett M Barney1, Lauren J Eberhart2, Janet M Ohlert3, Carolann M Knutson3, Mary H Plunkett3.   

Abstract

Azotobacter vinelandii is a widely studied model diazotrophic (nitrogen-fixing) bacterium and also an obligate aerobe, differentiating it from many other diazotrophs that require environments low in oxygen for the function of the nitrogenase. As a free-living bacterium, A. vinelandii has evolved enzymes and transporters to minimize the loss of fixed nitrogen to the surrounding environment. In this study, we pursued efforts to target specific enzymes and further developed screens to identify individual colonies of A. vinelandii producing elevated levels of extracellular nitrogen. Targeted deletions were done to convert urea into a terminal product by disrupting the urease genes that influence the ability of A. vinelandii to recycle the urea nitrogen within the cell. Construction of a nitrogen biosensor strain was done to rapidly screen several thousand colonies disrupted by transposon insertional mutagenesis to identify strains with increased extracellular nitrogen production. Several disruptions were identified in the ammonium transporter gene amtB that resulted in the production of sufficient levels of extracellular nitrogen to support the growth of the biosensor strain. Further studies substituting the biosensor strain with the green alga Chlorella sorokiniana confirmed that levels of nitrogen produced were sufficient to support the growth of this organism when the medium was supplemented with sufficient sucrose to support the growth of the A. vinelandii in coculture. The nature and quantities of nitrogen released by urease and amtB disruptions were further compared to strains reported in previous efforts that altered the nifLA regulatory system to produce elevated levels of ammonium. These results reveal alternative approaches that can be used in various combinations to yield new strains that might have further application in biofertilizer schemes.
Copyright © 2015, American Society for Microbiology. All Rights Reserved.

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Year:  2015        PMID: 25888177      PMCID: PMC4475869          DOI: 10.1128/AEM.00554-15

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  46 in total

Review 1.  Amt/MEP/Rh proteins conduct ammonia.

Authors:  Fritz K Winkler
Journal:  Pflugers Arch       Date:  2005-11-05       Impact factor: 3.657

2.  THE CHEMICAL COMPOSITION OF CHLORELLA; EFFECT OF ENVIRONMENTAL CONDITIONS.

Authors:  H A Spoehr; H W Milner
Journal:  Plant Physiol       Date:  1949-01       Impact factor: 8.340

3.  A correction in the nucleotide sequence of the Tn903 kanamycin resistance determinant in pUC4K.

Authors:  L A Taylor; R E Rose
Journal:  Nucleic Acids Res       Date:  1988-01-11       Impact factor: 16.971

4.  The basis of ammonium release in nifL mutants of Azotobacter vinelandii.

Authors:  B Brewin; P Woodley; M Drummond
Journal:  J Bacteriol       Date:  1999-12       Impact factor: 3.490

5.  Trapping a hydrazine reduction intermediate on the nitrogenase active site.

Authors:  Brett M Barney; Mikhail Laryukhin; Robert Y Igarashi; Hong-In Lee; Patricia C Dos Santos; Tran-Chin Yang; Brian M Hoffman; Dennis R Dean; Lance C Seefeldt
Journal:  Biochemistry       Date:  2005-06-07       Impact factor: 3.162

6.  Sequence and molecular analysis of the nifL gene of Azotobacter vinelandii.

Authors:  G Blanco; M Drummond; P Woodley; C Kennedy
Journal:  Mol Microbiol       Date:  1993-08       Impact factor: 3.501

7.  Genome sequence of Azotobacter vinelandii, an obligate aerobe specialized to support diverse anaerobic metabolic processes.

Authors:  João C Setubal; Patricia dos Santos; Barry S Goldman; Helga Ertesvåg; Guadelupe Espin; Luis M Rubio; Svein Valla; Nalvo F Almeida; Divya Balasubramanian; Lindsey Cromes; Leonardo Curatti; Zijin Du; Eric Godsy; Brad Goodner; Kaitlyn Hellner-Burris; José A Hernandez; Katherine Houmiel; Juan Imperial; Christina Kennedy; Timothy J Larson; Phil Latreille; Lauren S Ligon; Jing Lu; Mali Maerk; Nancy M Miller; Stacie Norton; Ina P O'Carroll; Ian Paulsen; Estella C Raulfs; Rebecca Roemer; James Rosser; Daniel Segura; Steve Slater; Shawn L Stricklin; David J Studholme; Jian Sun; Carlos J Viana; Erik Wallin; Baomin Wang; Cathy Wheeler; Huijun Zhu; Dennis R Dean; Ray Dixon; Derek Wood
Journal:  J Bacteriol       Date:  2009-05-08       Impact factor: 3.490

8.  Substrate interaction at an iron-sulfur face of the FeMo-cofactor during nitrogenase catalysis.

Authors:  Brett M Barney; Robert Y Igarashi; Patricia C Dos Santos; Dennis R Dean; Lance C Seefeldt
Journal:  J Biol Chem       Date:  2004-10-01       Impact factor: 5.157

9.  Crystal structure of the L protein of Rhodobacter sphaeroides light-independent protochlorophyllide reductase with MgADP bound: a homologue of the nitrogenase Fe protein.

Authors:  Ranjana Sarma; Brett M Barney; Trinity L Hamilton; Alma Jones; Lance C Seefeldt; John W Peters
Journal:  Biochemistry       Date:  2008-12-09       Impact factor: 3.162

10.  Transcriptomic profiling of Bacillus amyloliquefaciens FZB42 in response to maize root exudates.

Authors:  Ben Fan; Lilia C Carvalhais; Anke Becker; Dmitri Fedoseyenko; Nicolaus von Wirén; Rainer Borriss
Journal:  BMC Microbiol       Date:  2012-06-21       Impact factor: 3.605

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  17 in total

1.  Transcriptional Analysis of an Ammonium-Excreting Strain of Azotobacter vinelandii Deregulated for Nitrogen Fixation.

Authors:  Brett M Barney; Mary H Plunkett; Velmurugan Natarajan; Florence Mus; Carolann M Knutson; John W Peters
Journal:  Appl Environ Microbiol       Date:  2017-09-29       Impact factor: 4.792

2.  Microbial mutualism dynamics governed by dose-dependent toxicity of cross-fed nutrients.

Authors:  Breah LaSarre; Alexandra L McCully; Jay T Lennon; James B McKinlay
Journal:  ISME J       Date:  2016-11-29       Impact factor: 10.302

3.  Deferred control of ammonium cross-feeding in a N2-fixing bacterium-microalga artificial consortium.

Authors:  Rafael Ambrosio; Leonardo Curatti
Journal:  Appl Microbiol Biotechnol       Date:  2021-03-09       Impact factor: 4.813

4.  Improved Stability of Engineered Ammonia Production in the Plant-Symbiont Azospirillum brasilense.

Authors:  Tim Schnabel; Elizabeth Sattely
Journal:  ACS Synth Biol       Date:  2021-09-30       Impact factor: 5.110

5.  Control of nitrogen fixation and ammonia excretion in Azorhizobium caulinodans.

Authors:  Timothy Lyndon Haskett; Ramakrishnan Karunakaran; Marcelo Bueno Batista; Ray Dixon; Philip Simon Poole
Journal:  PLoS Genet       Date:  2022-06-21       Impact factor: 6.020

6.  An Escherichia coli Nitrogen Starvation Response Is Important for Mutualistic Coexistence with Rhodopseudomonas palustris.

Authors:  Alexandra L McCully; Megan G Behringer; Jennifer R Gliessman; Evgeny V Pilipenko; Jeffrey L Mazny; Michael Lynch; D Allan Drummond; James B McKinlay
Journal:  Appl Environ Microbiol       Date:  2018-07-02       Impact factor: 4.792

Review 7.  Protons and pleomorphs: aerobic hydrogen production in Azotobacters.

Authors:  Jesse D Noar; José M Bruno-Bárcena
Journal:  World J Microbiol Biotechnol       Date:  2016-01-09       Impact factor: 3.312

8.  Two-Stage Continuous Conversion of Carbon Monoxide to Ethylene by Whole Cells of Azotobacter vinelandii.

Authors:  Jace Natzke; José M Bruno-Bárcena
Journal:  Appl Environ Microbiol       Date:  2020-05-19       Impact factor: 4.792

9.  Engineering Posttranslational Regulation of Glutamine Synthetase for Controllable Ammonia Production in the Plant Symbiont Azospirillum brasilense.

Authors:  Tim Schnabel; Elizabeth Sattely
Journal:  Appl Environ Microbiol       Date:  2021-06-25       Impact factor: 4.792

10.  Gene Fitness of Azotobacter vinelandii under Diazotrophic Growth.

Authors:  Carolann M Knutson; Meghan N Pieper; Brett M Barney
Journal:  J Bacteriol       Date:  2021-09-27       Impact factor: 3.490

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