Literature DB >> 25886813

Identification and Functional Characterizations of N-Terminal α-N-Methylation and Phosphorylation of Serine 461 in Human Poly(ADP-ribose) Polymerase 3.

Xiaoxia Dai1, Stuart L Rulten2, Changjun You1, Keith W Caldecott2, Yinsheng Wang1.   

Abstract

Poly(ADP-ribose) polymerase 3 (PARP3) is a member of the PARP family enzymes which catalyze the ADP-ribosylation of proteins. PARP3 plays an important role in DNA damage repair and mitotic progression. In this study, we identified, using mass spectrometric techniques, two novel post-translational modification sites in PARP3, α-N-methylation and phosphorylation of serine 461 (S461). We found that the N-terminal α-amino group of PARP3 is heavily methylated in human cells, and N-terminal RCC1 methyltransferase (NRMT) is a key enzyme required for this methylation. We also observed that the phosphorylation level of S461 in PARP3 could be reduced in human cells upon treatment with flavopiridol, a cyclin-dependent kinase inhibitor. Moreover, we demonstrated that S461 phosphorylation, but not α-N-methylation of PARP3, may be involved in the cellular response toward DNA double-strand breaks. These findings provide novel insights into the post-translational regulation of PARP3.

Entities:  

Keywords:  DNA double-strand break; LC−MS/MS; N-terminal methylation; NRMT; PARP3; phosphorylation; post-translational modification

Mesh:

Substances:

Year:  2015        PMID: 25886813      PMCID: PMC4703312          DOI: 10.1021/acs.jproteome.5b00126

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  43 in total

1.  Poly(ADP-ribose) polymerase 3 (PARP3), a newcomer in cellular response to DNA damage and mitotic progression.

Authors:  Christian Boehler; Laurent R Gauthier; Oliver Mortusewicz; Denis S Biard; Jean-Michel Saliou; Anne Bresson; Sarah Sanglier-Cianferani; Susan Smith; Valérie Schreiber; François Boussin; Françoise Dantzer
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-26       Impact factor: 11.205

2.  PARP-3 is a mono-ADP-ribosylase that activates PARP-1 in the absence of DNA.

Authors:  Olga Loseva; Ann-Sofie Jemth; Helen E Bryant; Herwig Schüler; Lari Lehtiö; Tobias Karlberg; Thomas Helleday
Journal:  J Biol Chem       Date:  2010-01-11       Impact factor: 5.157

3.  gammaH2AX foci analysis for monitoring DNA double-strand break repair: strengths, limitations and optimization.

Authors:  Markus Löbrich; Atsushi Shibata; Andrea Beucher; Anna Fisher; Michael Ensminger; Aaron A Goodarzi; Olivia Barton; Penny A Jeggo
Journal:  Cell Cycle       Date:  2010-03-02       Impact factor: 4.534

4.  PARP-3 and APLF function together to accelerate nonhomologous end-joining.

Authors:  Stuart L Rulten; Anna E O Fisher; Isabelle Robert; Maria C Zuma; Michele Rouleau; Limei Ju; Guy Poirier; Bernardo Reina-San-Martin; Keith W Caldecott
Journal:  Mol Cell       Date:  2011-01-07       Impact factor: 17.970

5.  NRMT is an alpha-N-methyltransferase that methylates RCC1 and retinoblastoma protein.

Authors:  Christine E Schaner Tooley; Janusz J Petkowski; Tara L Muratore-Schroeder; Jeremy L Balsbaugh; Jeffrey Shabanowitz; Michal Sabat; Wladek Minor; Donald F Hunt; Ian G Macara
Journal:  Nature       Date:  2010-08-26       Impact factor: 49.962

6.  Structural basis for inhibitor specificity in human poly(ADP-ribose) polymerase-3.

Authors:  Lari Lehtiö; Ann-Sofie Jemth; Ruairi Collins; Olga Loseva; Andreas Johansson; Natalia Markova; Martin Hammarström; Alex Flores; Lovisa Holmberg-Schiavone; Johan Weigelt; Thomas Helleday; Herwig Schüler; Tobias Karlberg
Journal:  J Med Chem       Date:  2009-05-14       Impact factor: 7.446

7.  A human 5'-tyrosyl DNA phosphodiesterase that repairs topoisomerase-mediated DNA damage.

Authors:  Felipe Cortes Ledesma; Sherif F El Khamisy; Maria C Zuma; Kay Osborn; Keith W Caldecott
Journal:  Nature       Date:  2009-10-01       Impact factor: 49.962

Review 8.  Toward a unified nomenclature for mammalian ADP-ribosyltransferases.

Authors:  Michael O Hottiger; Paul O Hassa; Bernhard Lüscher; Herwig Schüler; Friedrich Koch-Nolte
Journal:  Trends Biochem Sci       Date:  2010-01-26       Impact factor: 13.807

9.  Quantification of protein phosphorylation by liquid chromatography-mass spectrometry.

Authors:  Michael J Previs; Peter VanBuren; Kelly J Begin; Jim O Vigoreaux; Martin M LeWinter; Dwight E Matthews
Journal:  Anal Chem       Date:  2008-07-08       Impact factor: 6.986

10.  Alternative-NHEJ is a mechanistically distinct pathway of mammalian chromosome break repair.

Authors:  Nicole Bennardo; Anita Cheng; Nick Huang; Jeremy M Stark
Journal:  PLoS Genet       Date:  2008-06-27       Impact factor: 6.020

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  15 in total

1.  Probing the Plasticity in the Active Site of Protein N-terminal Methyltransferase 1 Using Bisubstrate Analogues.

Authors:  Dongxing Chen; Cheng Dong; Guangping Dong; Karthik Srinivasan; Jinrong Min; Nicholas Noinaj; Rong Huang
Journal:  J Med Chem       Date:  2020-07-16       Impact factor: 7.446

2.  The N-terminal methyltransferase homologs NRMT1 and NRMT2 exhibit novel regulation of activity through heterotrimer formation.

Authors:  Jon D Faughn; William L Dean; Christine E Schaner Tooley
Journal:  Protein Sci       Date:  2018-09-24       Impact factor: 6.725

3.  Discovery of Bisubstrate Inhibitors for Protein N-Terminal Methyltransferase 1.

Authors:  Dongxing Chen; Guangping Dong; Nicholas Noinaj; Rong Huang
Journal:  J Med Chem       Date:  2019-03-27       Impact factor: 7.446

4.  Selective Peptidomimetic Inhibitors of NTMT1/2: Rational Design, Synthesis, Characterization, and Crystallographic Studies.

Authors:  Brianna D Mackie; Dongxing Chen; Guangping Dong; Cheng Dong; Haley Parker; Christine E Schaner Tooley; Nicholas Noinaj; Jinrong Min; Rong Huang
Journal:  J Med Chem       Date:  2020-08-05       Impact factor: 7.446

5.  Novel regulation of the transcription factor ZHX2 by N-terminal methylation.

Authors:  Meghan M Conner; Haley V Parker; Daniela R Falcone; Gehoon Chung; Christine E Schaner Tooley
Journal:  Transcription       Date:  2022-05-25

Review 6.  Past, present, and perspectives of protein N-terminal methylation.

Authors:  Krystal Diaz; Ying Meng; Rong Huang
Journal:  Curr Opin Chem Biol       Date:  2021-04-08       Impact factor: 8.972

7.  Structure-based Discovery of Cell-Potent Peptidomimetic Inhibitors for Protein N-Terminal Methyltransferase 1.

Authors:  Dongxing Chen; Guangping Dong; Youchao Deng; Nicholas Noinaj; Rong Huang
Journal:  ACS Med Chem Lett       Date:  2021-03-01       Impact factor: 4.632

8.  Modulation of N-terminal methyltransferase 1 by an N6-methyladenosine-based epitranscriptomic mechanism.

Authors:  David Bade; Qian Cai; Lin Li; Kailin Yu; Xiaoxia Dai; Weili Miao; Yinsheng Wang
Journal:  Biochem Biophys Res Commun       Date:  2021-02-06       Impact factor: 3.575

9.  Chemoproteomic Study Uncovers HemK2/KMT9 As a New Target for NTMT1 Bisubstrate Inhibitors.

Authors:  Dongxing Chen; Ying Meng; Dan Yu; Nicholas Noinaj; Xiaodong Cheng; Rong Huang
Journal:  ACS Chem Biol       Date:  2021-06-30       Impact factor: 4.634

10.  Structural basis for substrate recognition by the human N-terminal methyltransferase 1.

Authors:  Cheng Dong; Yunfei Mao; Wolfram Tempel; Su Qin; Li Li; Peter Loppnau; Rong Huang; Jinrong Min
Journal:  Genes Dev       Date:  2015-11-05       Impact factor: 11.361

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