| Literature DB >> 25886466 |
Xiong Li1, Yanli Zhou1, Yunqiang Yang2, Shihai Yang3, Xudong Sun2, Yongping Yang2.
Abstract
Cadmium (Cd) pollution is an environmental problem worldwide. Phytoremediation is a convenient method of removing Cd from both soil and water, but its efficiency is still low, especially in aquatic environments. Scientists have been trying to improve the ability of plants to absorb and accumulate Cd based on interactions between plants and Cd, especially the mechanism by which plants resist Cd. Eichhornia crassipes and Pistia stratiotes are aquatic plants commonly used in the phytoremediation of heavy metals. In the present study, we conducted physiological and biochemical analyses to compare the resistance of these two species to Cd stress at 100 mg/L. E. crassipes showed stronger resistance and was therefore used for subsequent comparative proteomics to explore the potential mechanism of E. crassipes tolerance to Cd stress at the protein level. The expression patterns of proteins in different functional categories revealed that the physiological activities and metabolic processes of E. crassipes were affected by exposure to Cd stress. However, when some proteins related to these processes were negatively inhibited, some analogous proteins were induced to compensate for the corresponding functions. As a result, E. crassipes could maintain more stable physiological parameters than P. stratiotes. Many stress-resistance substances and proteins, such as proline and heat shock proteins (HSPs) and post translational modifications, were found to be involved in the protection and repair of functional proteins. In addition, antioxidant enzymes played important roles in ROS detoxification. These findings will facilitate further understanding of the potential mechanism of plant response to Cd stress at the protein level.Entities:
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Year: 2015 PMID: 25886466 PMCID: PMC4401520 DOI: 10.1371/journal.pone.0124304
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1Changes in morphology and chlorophyll fluorescence of E. crassipes and P. stratiotes exposed to 100 mg/L Cd for different times.
A: Changes in leaf and root morphology. B: Fv/Fm images. The pseudocolor code depicted at the top of the image ranges from 0 (red) to 1 (purple). C: Average Fv/Fm values. Data are the means ± SE. Different letters following mean values indicate significant differences (Tukey’s test, P<0.05).
Fig 2Changes in photosynthetic characteristics and reactive oxygen species (ROS) of E. crassipes and P. stratiotes exposed to 100 mg/L Cd for different times.
A: Photosynthetic rate change. B: Stomatal conductance change. C: In situ detection of H2O2 and O2 -. Data are presented as mean ± standard error. Different letters following mean values indicate significant differences (Tukey’s test, P<0.05).
Fig 3Changes in malondialdehyde (MDA) and proline content in E. crassipes and P. stratiotes exposed to 100 mg/L Cd for different times.
A: MDA content change. B: Proline content change. Data are presented as mean ± standard error. Different letters following mean values indicate significant differences (Tukey’s test, P<0.05).
Fig 4Changes in antioxidant enzyme activity in E. crassipes and P. stratiotes exposed to 100 mg/L Cd for different times.
A: CAT activity. B: APX activity. C: GR activity. D: SOD activity. Data are presented as mean ± standard error. Different letters following mean values indicate significant differences (Tukey’s test, P<0.05).
Fig 5Comparative proteomics analyses of four E. crassipes samples treated with 100 mg/L Cd for different times.
A: Representative 2-DE (the control sample of the first set of gel images) showing spot numbers of identified proteins. B: Hierarchical clustering of the identified protein expression profiles of different samples. Different colors correspond to the protein log-transformed fold-change ratios depicted in the bar on the left of the figure. C: Venn diagram analysis of differentially expressed proteins of each treated sample compared with the control sample (0d). “+” and “-” represent up-regulated and down-regulated proteins, respectively.
Identification and analysis of differentially expressed proteins in leaves of Eichhornia crassipes treated by Cd stress for different times.
| Spot | Protein name | Acc. No. | Theo. Mw/pI | Exp. Mw/pI | SC | Score | Organism | Ratio | ||
|---|---|---|---|---|---|---|---|---|---|---|
| 2d/0d | 3d/0d | 5d/0d | ||||||||
|
| ||||||||||
| 6 | putative rubisco subunit binding-protein alpha subunit precursor (60 kDa chaperonin alpha subunit) | gi|31193919 | 61.36/5.36 | 68.71/5.05 | 29.11 | 118 |
| 0.87 | 0.72 | 0.54 |
| 7 | predicted ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic-like | gi|359481752 | 52.19/5.69 | 57.14/5.11 | 14.77 | 394 |
| 0.75 | 0.48 | 0.45 |
| 12 | ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 | gi|12620881 | 48.19/5.54 | 38.71/5.30 | 19.63 | 334 |
| 0.75 | 0.64 | 0.49 |
| 14 | RuBisCO activase | gi|445628 | 42.95/5.50 | 40.17/5.43 | 12.79 | 115 |
| 0.70 | 0.59 | 0.52 |
| 24 | fructose-bisphosphate aldolase, chloroplast precursor, putative, expressed | gi|108864048 | 41.81/6.07 | 39.74/6.34 | 24.22 | 370 |
| 0.60 | 0.56 | 0.42 |
| 26 | chloroplast stem-loop binding protein-41 | gi|15229384 | 44.07/8.54 | 38.46/6.54 | 14.25 | 141 |
| 0.90 | 0.66 | 0.52 |
| 34 | chloroplast photosynthetic water oxidation complex 33kDa subunit precursor | gi|152143640 | 28.48/5.48 | 41.99/5.12 | 22.64 | 159 |
| 0.44 | 0.34 | 0.28 |
| 35 | OEE1 | gi|302595735 | 34.49/5.40 | 39.98/5.19 | 30.86 | 435 |
| 0.92 | 0.72 | 0.48 |
| 45 | predicted carbonic anhydrase, chloroplastic-like | gi|357130587 | 51.29/8.90 | 34.35/5.67 | 21.57 | 57 |
| 0.82 | 0.66 | 0.55 |
| 52 | thylakoid luminal 19 kDa protein | gi|357457687 | 26.38/5.82 | 27.09/5.27 | 16.94 | 96 |
| 1.17 | 1.55 | 1.03 |
| 59 | ribulose bisphosphate carboxylase | gi|119720808 | 18.71/8.23 | 17.89/6.84 | 37.65 | 99 |
| 1.47 | 1.72 | 2.56 |
|
| ||||||||||
| 5 | maturase K | gi|197257987 | 57.74/9.86 | 78.01/6.02 | 17.55 | 40 |
| 1.12 | 1.39 | 1.66 |
| 15 | actin | gi|218533930 | 41.88/5.31 | 42.44/5.55 | 55.97 | 801 |
| 2.22 | 1.25 | 1.69 |
| 18 | old-yellow-enzyme homolog | gi|2232254 | 42.13/5.90 | 41.23/5.94 | 11.08 | 132 |
| 1.70 | 2.30 | 3.11 |
|
| ||||||||||
|
| ||||||||||
| 16 | glutamine synthetase | gi|15238559 | 47.78/6.43 | 41.86/5.72 | 15.35 | 191 |
| 1.10 | 1.53 | 2.04 |
| 22 | beta-cyanoalanine synthase | gi|30840956 | 38.26/6.38 | 40.62/6.13 | 6.53 | 75 |
| 1.14 | 0.88 | 0.66 |
| 23 | malate dehydrogenase | gi|320449084 | 35.79/5.76 | 39.95/6.30 | 25.9 | 176 |
| 1.06 | 0.95 | 0.64 |
| 27 | predicted aminomethyl transferase, mitochondrial-like | gi|356555678 | 44.72/8.77 | 43.51/6.97 | 28.01 | 85 |
| 0.97 | 0.76 | 0.53 |
| 37 | xyloglucantransglusylase/hydrolase 1 | gi|304273280 | 32.13/6.06 | 39.46/5.53 | 3.93 | 69 |
| 0.88 | 0.77 | 0.62 |
| 44 | cytosolic triosephosphate isomerase | gi|310768740 | 27.26/5.04 | 34.51/5.21 | 13.04 | 67 |
| 1.31 | 1.82 | 2.32 |
| 47 | triosephosphate isomerase, cytosolic | gi|226495391 | 27.24/5.52 | 35.11/6.24 | 29.25 | 87 |
| 1.17 | 1.27 | 1.70 |
| 58 | granule-bound starch synthase precursor | gi|4588607 | 63.39/7.86 | 15.78/5.80 | 51.68 | 772 |
| 1.28 | 0.77 | 0.52 |
|
| ||||||||||
| 11 | AMP deaminase family protein | gi|566209963 | 90.88/6.30 | 40.03/5.11 | 10.36 | 51 |
| 0.61 | 0.79 | 0.81 |
| 40 | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | gi|148787961 | 48.36/6.34 | 40.02/6.62 | 45.6 | 685 |
| 2.33 | 2.70 | 2.88 |
| 41 | predicted probable ATP synthase 24 kDa subunit, mitochondrial | gi|225438529 | 27.67/9.26 | 36.26/6.05 | 17.01 | 90 |
| 2.05 | 2.60 | 3.27 |
| 56 | ATP synthase CF1 epsilon subunit (chloroplast) | gi|374257035 | 14.69/4.95 | 20.26/5.03 | 53.73 | 466 |
| 1.17 | 1.28 | 1.71 |
|
| ||||||||||
| 1 | glycine dehydrogenase, putative | gi|255550796 | 115.78/6.57 | 108.69/6.37 | 8.8 | 126 |
| 1.74 | 2.29 | 3.04 |
| 8 | glycine dehydrogenase, putative | gi|255580957 | 42.88/6.05 | 45.19/6.23 | 36.97 | 611 |
| 1.28 | 1.77 | 2.19 |
| 19 | plastidic aldolase | gi|164470331 | 43.16/6.38 | 38.24/5.43 | 35.52 | 229 |
| 2.16 | 3.80 | 4.30 |
| 20 | plastidic aldolase family protein | gi|224094919 | 42.72/6.85 | 38.56/5.72 | 37.37 | 67 |
| 1.50 | 1.99 | 2.44 |
| 25 | predicted glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic-like | gi|357163943 | 43.11/7.01 | 41.09/6.55 | 8.44 | 100 |
| 1.25 | 0.61 | 0.43 |
| 28 | isoflavone reductase-like protein | gi|373939378 | 33.29/5.74 | 35.81/6.10 | 4.25 | 88 |
| 1.73 | 2.78 | 3.06 |
| 29 | phenylcoumaran benzylic ether reductase | gi|3114899 | 33.99/5.66 | 35.62/5.99 | 14.94 | 86 |
| 2.77 | 3.43 | 3.91 |
| 30 | pterocarpan reductase | gi|116077986 | 33.97/5.94 | 45.60/5.82 | 6.13 | 89 |
| 1.36 | 2.93 | 3.20 |
| 36 | oxidoreductase, aldo/keto reductase family protein, expressed isoform 1 | gi|590718087 | 39.48/7.56 | 39.74/5.33 | 27.24 | 52 |
| 1.16 | 0.57 | 0.76 |
| 46 | peptide methionine sulfoxide reductase | gi|357494493 | 22.92/5.84 | 32.97/5.82 | 17.82 | 95 |
| 1.77 | 1.88 | 1.57 |
|
| ||||||||||
| 2 | chloroplast heat shock protein 70–1 | gi|15233779 | 76.58/5.07 | 76.57/4.93 | 14.35 | 281 |
| 1.55 | 2.05 | 2.34 |
| 3 | heat shock protein, putative | gi|255570990 | 75.43/5.35 | 76.45/4.97 | 15.79 | 612 |
| 1.64 | 2.10 | 2.67 |
| 4 | 70 kDa heat shock cognate protein 2 | gi|45331283 | 71.58/5.14 | 76.65/5.34 | 34.41 | 622 |
| 2.03 | 2.20 | 2.04 |
| 33 | 14-3-3 family protein | gi|55375985 | 29.79/4.75 | 40.02/4.75 | 29.77 | 167 |
| 1.02 | 1.61 | 2.48 |
| 42 | 2-oxoglutarate-iron(II) dependent oxygenase | gi|302815609 | 36.85/5.77 | 35.96/5.93 | 17.43 | 39 |
| 1.17 | 1.52 | 2.19 |
|
| ||||||||||
| 43 | cytosolic ascorbate peroxidase | gi|153799884 | 27.95/5.16 | 35.19/5.67 | 22.71 | 189 |
| 1.13 | 1.86 | 2.37 |
| 51 | 2-cys-peroxiredoxin | gi|327422155 | 22.21/4.92 | 30.89/4.59 | 18.59 | 303 |
| 1.23 | 1.51 | 1.75 |
| 55 | chloroplast copper/zinc superoxide dismutase | gi|304651504 | 20.38/5.31 | 20.15/5.38 | 13.93 | 191 |
| 2.07 | 2.44 | 2.76 |
|
| ||||||||||
| 21 | cation efflux family protein isoform 2 | gi|590613599 | 45.81/5.76 | 39.07/5.88 | 33.25 | 41 |
| 1.07 | 1.28 | 1.42 |
| 48 | calcineurin B-like protein | gi|357437489 | 28.33/4.68 | 31.18/5.46 | 6.25 | 46 |
| 1.46 | 1.68 | 1.81 |
|
| ||||||||||
| 9 | elongation factor tu, putative | gi|255567660 | 49.29/6.62 | 43.25/6.46 | 23.83 | 120 |
| 1.69 | 1.42 | 1.15 |
| 10 | peptidyl-prolyl cis-trans isomerase, putative | gi|255552604 | 51.55/4.97 | 39.73/4.78 | 17.63 | 71 |
| 1.12 | 1.91 | 2.79 |
| 17 | chloroplast translational elongation factor Tu | gi|6525065 | 50.55/6.05 | 42.76/5.84 | 27.62 | 370 |
| 1.47 | 1.66 | 1.85 |
| 31 | nucleic acid binding protein1 | gi|162463757 | 33.15/4.60 | 40.55/4.33 | 21.77 | 170 |
| 0.84 | 0.74 | 0.66 |
| 32 | putative elongation factor | gi|90704791 | 24.69/4.56 | 41.07/4.65 | 10.62 | 112 |
| 1.34 | 1.76 | 1.89 |
| 39 | DNA-binding storekeeper protein-related transcriptional regulator | gi|18411272 | 34.04/5.84 | 36.23/5.85 | 18.45 | 42 |
| 1.21 | 1.45 | 1.66 |
| 54 | small ribosomal protein subunit 4 | gi|67035885 | 21.91/9.91 | 23.29/6.21 | 21.52 | 61 |
| 1.04 | 1.02 | 1.51 |
|
| ||||||||||
| 38 | predicted phosphoglycolate phosphatase-like | gi|357164381 | 39.01/5.76 | 40.94/5.66 | 14.21 | 107 |
| 1.47 | 1.99 | 2.23 |
| 49 | predicted methyltransferase-like protein 23-like isoform X1 | gi|568825272 | 27.17/5.06 | 31.59/5.02 | 6.87 | 41 |
| 1.10 | 1.50 | 1.31 |
| 57 | ubiquitin-like superfamily protein | gi|145360542 | 27.71/6.33 | 22.99/4.74 | 23.67 | 46 |
| 1.14 | 1.30 | 1.56 |
|
| ||||||||||
| 13 | ALA-interacting subunit 5 | gi|42572169 | 32.05/9.28 | 35.54/5.32 | 22.26 | 49 |
| 1.34 | 1.65 | 1.98 |
| 50 | zinc knuckle family protein | gi|357498441 | 41.47/8.56 | 30.54/4.68 | 48.5 | 43 |
| 1.12 | 1.29 | 1.57 |
| 53 | AP3-2 type 1 | gi|27990434 | 22.45/8.98 | 26.09/6.48 | 27.98 | 58 |
| 1.22 | 1.83 | 1.38 |
aAcc. No., database accession numbers according to NCBInr;
bTheo. Mw/pI, theoretical Mw/pI;
cExp. Mw/pI, experimental Mw/pI;
dSC, sequence coverage;
eRatio, different protein spot intensity ratios of samples after 2 d, 3 d and 5 d exposure relative to the control (0d).
Fig 6Functional classification of the identified proteins.