Literature DB >> 25884232

Advanced solvent based methods for molecular characterization of soil organic matter by high-resolution mass spectrometry.

Malak M Tfaily1, Rosalie K Chu1, Nikola Tolić1, Kristyn M Roscioli1, Christopher R Anderton1, Ljiljana Paša-Tolić1, Errol W Robinson1, Nancy J Hess1.   

Abstract

Soil organic matter (SOM), a complex, heterogeneous mixture of above and belowground plant litter and animal and microbial residues at various degrees of decomposition, is a key reservoir for carbon (C) and nutrient biogeochemical cycling in soil based ecosystems. A limited understanding of the molecular composition of SOM limits the ability to routinely decipher chemical processes within soil and accurately predict how terrestrial carbon fluxes will respond to changing climatic conditions and land use. To elucidate the molecular-level structure of SOM, we selectively extracted a broad range of intact SOM compounds by a combination of different organic solvents from soils with a wide range of C content. Our use of electrospray ionization (ESI) coupled with Fourier transform ion cyclotron resonance mass spectrometry (FTICR MS) and a suite of solvents with varying polarity significantly expands the inventory of the types of organic molecules present in soils. Specifically, we found that hexane is selective for lipid-like compounds with very low O/C ratios (<0.1); water (H2O) was selective for carbohydrates with high O/C ratios; acetonitrile (ACN) preferentially extracts lignin, condensed structures, and tannin polyphenolic compounds with O/C > 0.5; methanol (MeOH) has higher selectivity toward compounds characterized with low O/C < 0.5; and hexane, MeOH, ACN, and H2O solvents increase the number and types of organic molecules extracted from soil for a broader range of chemically diverse soil types. Our study of SOM molecules by ESI FTICR MS revealed new insight into the molecular-level complexity of organics contained in soils. We present the first comparative study of the molecular composition of SOM from different ecosystems using ultra high-resolution mass spectrometry.

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Year:  2015        PMID: 25884232     DOI: 10.1021/acs.analchem.5b00116

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  17 in total

1.  Evaluation of In Silico Multifeature Libraries for Providing Evidence for the Presence of Small Molecules in Synthetic Blinded Samples.

Authors:  Jamie R Nuñez; Sean M Colby; Dennis G Thomas; Malak M Tfaily; Nikola Tolic; Elin M Ulrich; Jon R Sobus; Thomas O Metz; Justin G Teeguarden; Ryan S Renslow
Journal:  J Chem Inf Model       Date:  2019-08-20       Impact factor: 4.956

2.  Spectroscopic and molecular characterization of humic substances (HS) from soils and sediments in a watershed: comparative study of HS chemical fractions and the origins.

Authors:  Morgane Derrien; Yun Kyung Lee; Jae-Eun Park; Penghui Li; Meilian Chen; Sang Hee Lee; Soo Hyung Lee; Jun-Bae Lee; Jin Hur
Journal:  Environ Sci Pollut Res Int       Date:  2017-06-02       Impact factor: 4.223

3.  A Customizable Flow Injection System for Automated, High Throughput, and Time Sensitive Ion Mobility Spectrometry and Mass Spectrometry Measurements.

Authors:  Daniel J Orton; Malak M Tfaily; Ronald J Moore; Brian L LaMarche; Xueyun Zheng; Thomas L Fillmore; Rosalie K Chu; Karl K Weitz; Matthew E Monroe; Ryan T Kelly; Richard D Smith; Erin S Baker
Journal:  Anal Chem       Date:  2017-12-13       Impact factor: 6.986

4.  Indexing Permafrost Soil Organic Matter Degradation Using High-Resolution Mass Spectrometry.

Authors:  Benjamin F Mann; Hongmei Chen; Elizabeth M Herndon; Rosalie K Chu; Nikola Tolic; Evan F Portier; Taniya Roy Chowdhury; Errol W Robinson; Stephen J Callister; Stan D Wullschleger; David E Graham; Liyuan Liang; Baohua Gu
Journal:  PLoS One       Date:  2015-06-12       Impact factor: 3.240

5.  Diurnal cycling of rhizosphere bacterial communities is associated with shifts in carbon metabolism.

Authors:  Christopher Staley; Abigail P Ferrieri; Malak M Tfaily; Yaya Cui; Rosalie K Chu; Ping Wang; Jared B Shaw; Charles K Ansong; Heather Brewer; Angela D Norbeck; Meng Markillie; Fernanda do Amaral; Thalita Tuleski; Tomás Pellizzaro; Beverly Agtuca; Richard Ferrieri; Susannah G Tringe; Ljiljana Paša-Tolić; Gary Stacey; Michael J Sadowsky
Journal:  Microbiome       Date:  2017-06-24       Impact factor: 14.650

6.  Anaerobic microsites have an unaccounted role in soil carbon stabilization.

Authors:  Marco Keiluweit; Tom Wanzek; Markus Kleber; Peter Nico; Scott Fendorf
Journal:  Nat Commun       Date:  2017-11-24       Impact factor: 14.919

7.  Evaluation of an untargeted nano-liquid chromatography-mass spectrometry approach to expand coverage of low molecular weight dissolved organic matter in Arctic soil.

Authors:  Mallory P Ladd; Richard J Giannone; Paul E Abraham; Stan D Wullschleger; Robert L Hettich
Journal:  Sci Rep       Date:  2019-04-09       Impact factor: 4.379

8.  Shifts in pore connectivity from precipitation versus groundwater rewetting increases soil carbon loss after drought.

Authors:  A Peyton Smith; Ben Bond-Lamberty; Brian W Benscoter; Malak M Tfaily; C Ross Hinkle; Chongxuan Liu; Vanessa L Bailey
Journal:  Nat Commun       Date:  2017-11-06       Impact factor: 14.919

9.  Microbial Interactions With Dissolved Organic Matter Drive Carbon Dynamics and Community Succession.

Authors:  Xiaoqin Wu; Liyou Wu; Yina Liu; Ping Zhang; Qinghao Li; Jizhong Zhou; Nancy J Hess; Terry C Hazen; Wanli Yang; Romy Chakraborty
Journal:  Front Microbiol       Date:  2018-06-08       Impact factor: 5.640

10.  ftmsRanalysis: An R package for exploratory data analysis and interactive visualization of FT-MS data.

Authors:  Lisa M Bramer; Amanda M White; Kelly G Stratton; Allison M Thompson; Daniel Claborne; Kirsten Hofmockel; Lee Ann McCue
Journal:  PLoS Comput Biol       Date:  2020-03-16       Impact factor: 4.475

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