Literature DB >> 25882787

Collective effects of SNPs on transgenerational inheritance in Caenorhabditis elegans and budding yeast.

Zuobin Zhu1, Xian Man1, Mengying Xia1, Yimin Huang1, Dejian Yuan1, Shi Huang2.   

Abstract

We studied the collective effects of single nucleotide polymorphisms (SNPs) on transgenerational inheritance in Caenorhabditis elegans recombinant inbred advanced intercross lines (RIAILs) and yeast segregants. We divided the RIAILs and segregants into two groups of high and low minor allele content (MAC). RIAILs with higher MAC needed less generations of benzaldehyde training to gain a stable olfactory imprint and showed a greater change from normal after benzaldehyde training. Yeast segregants with higher MAC showed a more dramatic shortening of the lag phase length after ethanol exposure. The short lag phase as acquired by ethanol training was more dramatically lost after recovery in ethanol free medium for the high MAC group. We also found a preferential association between MAC and traits linked with higher number of additive QTLs. These results suggest a role for the collective effects of SNPs in transgenerational inheritance, and may help explain human variations in disease susceptibility.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  C. elegans; Collective effects; Genetic variations; Minor allele content (MAC); Quantitative trait loci; RIAILs; SNPs; Segregants; Transgenerational inheritance; Yeasts

Mesh:

Substances:

Year:  2015        PMID: 25882787     DOI: 10.1016/j.ygeno.2015.04.002

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  3 in total

1.  Enrichment of Minor Alleles of Common SNPs and Improved Risk Prediction for Parkinson's Disease.

Authors:  Zuobin Zhu; Dejian Yuan; Denghui Luo; Xitong Lu; Shi Huang
Journal:  PLoS One       Date:  2015-07-24       Impact factor: 3.240

2.  Accumulation of minor alleles and risk prediction in schizophrenia.

Authors:  Pei He; Xiaoyun Lei; Dejian Yuan; Zuobin Zhu; Shi Huang
Journal:  Sci Rep       Date:  2017-09-15       Impact factor: 4.379

3.  Collective effects of common SNPs in foraging decisions in Caenorhabditis elegans and an integrative method of identification of candidate genes.

Authors:  Zuobin Zhu; Qing Lu; Junjing Wang; Shi Huang
Journal:  Sci Rep       Date:  2015-11-19       Impact factor: 4.379

  3 in total

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