Literature DB >> 25880438

Clinical performance of the CytoScan Dx Assay in diagnosing developmental delay/intellectual disability.

Rolph Pfundt1, Kat Kwiatkowski2, Alan Roter2, Anju Shukla2, Eric Thorland3, Richard Hockett4, Barbara DuPont5, Eric T Fung2, Alka Chaubey5.   

Abstract

PURPOSE: The prevalence of developmental disabilities in the United States is reported to be 13.87% across all racial, ethnic, and socioeconomic groups. Microarrays have been recommended as first-tier tests for these patients. This study reports the diagnostic yield and potential actionability of findings using a high-density chromosomal microarray (CMA).
METHODS: The diagnostic yield of CytoScan Dx Assay in 960 patients was assessed with the Riggs criteria of actionability to evaluate predicted clinical utility.
RESULTS: Eighty-six percent of the subjects were assessed using a microarray as part of historical routine patient care (RPC). The rate of pathogenic findings was similar between RPC (13.3%) and the CytoScan Dx Assay (13.8%). Among the 138 patients who did not receive microarray as RPC, the diagnostic yield for CytoScan Dx Assay was 23.9% as compared with 14.5%, indicating a 9.4% improvement when using higher-resolution methods. Thirty-five percent of patients with abnormal findings had predicted clinical management implications.
CONCLUSIONS: This is the first study to assess the clinical performance of CytoScan Dx Assay. The assay's diagnostic yields are similar to those found in other studies of CMAs. Thirty-five percent of patients with abnormal findings are predicted to have clinical management implications that may improve health outcomes.

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Mesh:

Year:  2015        PMID: 25880438     DOI: 10.1038/gim.2015.51

Source DB:  PubMed          Journal:  Genet Med        ISSN: 1098-3600            Impact factor:   8.822


  15 in total

1.  Does race influence age of diagnosis for children with developmental delay?

Authors:  Joshua R Mann; Sarah Crawford; Lesly Wilson; Suzanne McDermott
Journal:  Disabil Health J       Date:  2008-07       Impact factor: 2.554

2.  Trends in the prevalence of developmental disabilities in US children, 1997-2008.

Authors:  Coleen A Boyle; Sheree Boulet; Laura A Schieve; Robin A Cohen; Stephen J Blumberg; Marshalyn Yeargin-Allsopp; Susanna Visser; Michael D Kogan
Journal:  Pediatrics       Date:  2011-05-23       Impact factor: 7.124

Review 3.  Consensus statement: chromosomal microarray is a first-tier clinical diagnostic test for individuals with developmental disabilities or congenital anomalies.

Authors:  David T Miller; Margaret P Adam; Swaroop Aradhya; Leslie G Biesecker; Arthur R Brothman; Nigel P Carter; Deanna M Church; John A Crolla; Evan E Eichler; Charles J Epstein; W Andrew Faucett; Lars Feuk; Jan M Friedman; Ada Hamosh; Laird Jackson; Erin B Kaminsky; Klaas Kok; Ian D Krantz; Robert M Kuhn; Charles Lee; James M Ostell; Carla Rosenberg; Stephen W Scherer; Nancy B Spinner; Dimitri J Stavropoulos; James H Tepperberg; Erik C Thorland; Joris R Vermeesch; Darrel J Waggoner; Michael S Watson; Christa Lese Martin; David H Ledbetter
Journal:  Am J Hum Genet       Date:  2010-05-14       Impact factor: 11.025

4.  Array analysis and karyotyping: workflow consequences based on a retrospective study of 36,325 patients with idiopathic developmental delay in the Netherlands.

Authors:  Ron Hochstenbach; Ellen van Binsbergen; John Engelen; Aggie Nieuwint; Abeltje Polstra; Pino Poddighe; Claudia Ruivenkamp; Birgit Sikkema-Raddatz; Dominique Smeets; Martin Poot
Journal:  Eur J Med Genet       Date:  2009-04-09       Impact factor: 2.708

5.  Chromosomal microarray testing influences medical management.

Authors:  Michael E Coulter; David T Miller; David J Harris; Pamela Hawley; Jonathan Picker; Amy E Roberts; Magdi M Sobeih; Mira Irons
Journal:  Genet Med       Date:  2011-09       Impact factor: 8.822

Review 6.  Array CGH in patients with learning disability (mental retardation) and congenital anomalies: updated systematic review and meta-analysis of 19 studies and 13,926 subjects.

Authors:  Gurdeep S Sagoo; Adam S Butterworth; Simon Sanderson; Charles Shaw-Smith; Julian P T Higgins; Hilary Burton
Journal:  Genet Med       Date:  2009-03       Impact factor: 8.822

7.  The impact of chromosomal microarray on clinical management: a retrospective analysis.

Authors:  Lindsay B Henderson; Carolyn D Applegate; Elizabeth Wohler; Molly B Sheridan; Julie Hoover-Fong; Denise A S Batista
Journal:  Genet Med       Date:  2014-03-13       Impact factor: 8.822

Review 8.  New microdeletion and microduplication syndromes: A comprehensive review.

Authors:  Julián Nevado; Rafaella Mergener; María Palomares-Bralo; Karen Regina Souza; Elena Vallespín; Rocío Mena; Víctor Martínez-Glez; María Ángeles Mori; Fernando Santos; Sixto García-Miñaur; Fé García-Santiago; Elena Mansilla; Luis Fernández; María Luisa de Torres; Mariluce Riegel; Pablo Lapunzina
Journal:  Genet Mol Biol       Date:  2014-03       Impact factor: 1.771

9.  How physicians use array comparative genomic hybridization results to guide patient management in children with developmental delay.

Authors:  Jennifer Saam; Jim Gudgeon; Emily Aston; Arthur R Brothman
Journal:  Genet Med       Date:  2008-03       Impact factor: 8.822

10.  Combined array CGH plus SNP genome analyses in a single assay for optimized clinical testing.

Authors:  Joanna Wiszniewska; Weimin Bi; Chad Shaw; Pawel Stankiewicz; Sung-Hae L Kang; Amber N Pursley; Seema Lalani; Patricia Hixson; Tomasz Gambin; Chun-hui Tsai; Hans-Georg Bock; Maria Descartes; Frank J Probst; Fernando Scaglia; Arthur L Beaudet; James R Lupski; Christine Eng; Sau Wai Cheung; Carlos Bacino; Ankita Patel
Journal:  Eur J Hum Genet       Date:  2013-05-22       Impact factor: 4.246

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  5 in total

Review 1.  Chromosomal Microarrays: Understanding Genetics of Neurodevelopmental Disorders and Congenital Anomalies.

Authors:  Jill A Rosenfeld; Ankita Patel
Journal:  J Pediatr Genet       Date:  2016-05-30

2.  Cost Effectiveness of Karyotyping, Chromosomal Microarray Analysis, and Targeted Next-Generation Sequencing of Patients with Unexplained Global Developmental Delay or Intellectual Disability.

Authors:  Yonghong Li; Lori A Anderson; Edward I Ginns; James J Devlin
Journal:  Mol Diagn Ther       Date:  2018-02       Impact factor: 4.074

3.  Clinical Performance of an Ultrahigh Resolution Chromosomal Microarray Optimized for Neurodevelopmental Disorders.

Authors:  Karen S Ho; Hope Twede; Rena Vanzo; Erin Harward; Charles H Hensel; Megan M Martin; Stephanie Page; Andreas Peiffer; Patricia Mowery-Rushton; Moises Serrano; E Robert Wassman
Journal:  Biomed Res Int       Date:  2016-11-16       Impact factor: 3.411

4.  Yield of comparative genomic hybridization microarray in pediatric neurology practice.

Authors:  Shibalik Misra; Greg Peters; Elizabeth Barnes; Simone Ardern-Holmes; Richard Webster; Christopher Troedson; Shekeeb S Mohammad; Deepak Gill; Manoj Menezes; Sachin Gupta; Peter Procopis; Jayne Antony; Manju A Kurian; Russell C Dale
Journal:  Neurol Genet       Date:  2019-10-23

5.  Chromosomal Microarray Analysis of Consecutive Individuals with Autism Spectrum Disorders Using an Ultra-High Resolution Chromosomal Microarray Optimized for Neurodevelopmental Disorders.

Authors:  Karen S Ho; E Robert Wassman; Adrianne L Baxter; Charles H Hensel; Megan M Martin; Aparna Prasad; Hope Twede; Rena J Vanzo; Merlin G Butler
Journal:  Int J Mol Sci       Date:  2016-12-09       Impact factor: 5.923

  5 in total

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