Literature DB >> 25878806

Crystal structure of dimanganese(II) zinc bis-[ortho-phosphate(V)] monohydrate.

Ghaleb Alhakmi1, Abderrazzak Assani1, Mohamed Saadi1, Lahcen El Ammari1.   

Abstract

The title compound, Mn2Zn(PO4)2·H2O, was obtained under hydro-thermal conditions. The structure is isotypic with other transition metal phosphates of the type M 3- xM' x (PO4)2·H2O, but shows no statistical disorder of the three metallic sites. The principal building units are distorted [MnO6] and [MnO5(H2O)] octa-hedra, a distorted [ZnO5] square pyramid and two regular PO4 tetra-hedra. The connection of the polyhedra leads to a framework structure. Two types of layers parallel to (-101) can be distinguished in this framework. One layer contains [Zn2O8] dimers linked to PO4 tetra-hedra via common edges. The other layer is more corrugated and contains [Mn2O8(H2O)2] dimers and [MnO6] octa-hedra linked together by common edges. The PO4 tetra-hedra link the two types of layers into a framework structure with channels parallel to [101]. The H atoms of the water mol-ecules point into the channels and form O-H⋯O hydrogen bonds (one of which is bifurcated) with framework O atoms across the channels.

Entities:  

Keywords:  Fe3(PO4)2·H2O structure type; crystal structure; hydro­thermal synthesis; transition metal phosphates

Year:  2015        PMID: 25878806      PMCID: PMC4384616          DOI: 10.1107/S2056989015000341

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

The great structural diversity of metal-based phosphates, associated with their physical properties makes this family of compounds inter­esting as potential functional materials, e.g. as catalysts (Viter & Nagornyi, 2009 ▸; Weng et al., 2009 ▸) or ion-exchangers (Jignasa et al., 2006 ▸). Among the wide variety of metal phosphates, one of our inter­ests is focused on mixed metallic orthophosphates of general formula M 3− (PO4)2·H2O. The present communication reports the hydro­thermal synthesis and structural characterization of a new member of this family, Mn2Zn(PO4)2·H2O.

Structural commentary

The structure of the title compound is built up from four different types of building units: [MnO6] and [MnO5(H2O)] octa­hedra, [ZnO5] square pyramids and PO4 tetra­hedra, as shown in Fig. 1 ▸. Whereas the [MnO6] octa­hedron is more or less regular with Mn—O distances in the range 2.1254 (13) to 2.2590 (13) Å, the [MnO5(H2O)] octa­hedron is significantly distorted with five equal Mn—O distances in the range 2.1191 (13) to 2.1556 (16) and one considerably longer Mn—O distance to the water ligand of 2.5163 (15) Å; the ZnO5 square pyramid is also distorted with four shorter Zn—O distances between 1.9546 (13) and 2.0347 (12) Å and one longer Zn—O distance, likewise to the water O atom [2.3093 (14) Å]; the two PO4 tetra­hedra are rather regular [P—O distances between 1.5322 (13) and 1.5570 (13) Å; O—P—O angles between 102.92 (7) and 111.62 (8)°]. These polyhedra are arranged in such a way as to build up two types of layers parallel to (01). One layer contains two [ZnO5] polyhedra linked together by edge-sharing into a [Zn2O8] dimer that in turn is linked to PO4 tetra­hedra. The other layer contains dimers of the type [Mn2O8(H2O)2] (also formed by edge-sharing of two [MnO5(H2O)] octa­hedra), connecting [MnO6] octa­hedra and PO4 tetra­hedra through common vertices. The two types of layers are linked by common edges and vertices into a framework structure with channels parallel to [101]. The water mol­ecules of the [MnO5(H2O)] octa­hedra protrude into these channels and develop hydrogen bonds (one bifurcated) of medium-to-weak strength to framework O atoms across the channels (Fig. 2 ▸; Table 1 ▸).
Figure 1

The principal building units in the structure of Mn2Zn(PO4)2·H2O. Displacement ellipsoids are drawn at the 50% probability level. Hydrogen bonds are indicated by dashed lines. [Symmetry codes: (i) −x + 1, −y + 1, −z + 1; (ii) x + , −y + , z + ; (iii) −x + 2, −y + 1, −z + 1; (iv) −x + , y + , −z + ; (v) −x + , y − , −z + ; (vi) x − , −y + , z − ; (vii) x − , −y + , z − ; (viii) −x + , y + , −z + .]

Figure 2

Polyhedral representation of Mn2Zn(PO4)2·H2O showing channels extending parallel to [101]. Hydrogen bonds are shown as dashed lines.

Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
O9H1O70.891.972.7866(19)151
O9H2O5i 0.912.162.8687(19)134
O9H2O1ii 0.912.483.0494(19)120

Symmetry codes: (i) ; (ii) .

The title compound adopts the Fe3(PO4)2·H2O structure type (Moore & Araki, 1975 ▸) and is isotypic with various structures of general formula M 3− (PO4)2·H2O: CuMn2(PO4)2·H2O (Liao et al., 1995 ▸); Co2.59Zn0.41(PO4)2·H2O (Sørensen et al., 2005 ▸); Co2.39Cu0.61(PO4)2·H2O (Assani et al., 2010 ▸); Mg1.65Cu1.35(PO4)2·H2O (Khmiyas et al. 2015 ▸).

Synthesis and crystallization

Crystals of Mn2Zn(PO4)2·H2O were obtained by hydro­thermal treatment of zinc oxide (0.0406 g), metallic manganese (0.0824 g), phospho­ric acid (0.1 ml) and 12.5 ml of distilled water, in a proportion corresponding to the molar ratio Zn: Mn: P = 1: 3: 3. The hydro­thermal reaction was conducted in a 23 ml Teflon-lined autoclave under autogenous pressure at 493 K for five days. After being filtered, washed with deionized water and dried in air, the reaction product consisted of two types of crystals, the first as off-white parallelepipeds corresponding to Mn7(PO4)2(HPO4)4 (Riou et al., 1987 ▸) and the second as colourless parallelepipeds corres­ponding to the title compound.

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 2 ▸. The O-bound H atoms were initially located in a difference map. In the last refinement cycle the distances were fixed at 0.89 and 0.91 Å, respectively, and the H atoms refined in the riding-model approximation with U iso(H) set to 1.5U eq(O). The highest peak and the deepest hole in the final Fourier map are at 0.32 Å and 0.30 Å, respectively, from Mn1 and Zn1.
Table 2

Experimental details

Crystal data
Chemical formulaMn2Zn(PO4)2H2O
M r 383.21
Crystal system, space groupMonoclinic, P21/n
Temperature (K)296
a, b, c ()8.1784(2), 10.1741(2), 9.0896(2)
()114.142(1)
V (3)690.17(3)
Z 4
Radiation typeMo K
(mm1)7.54
Crystal size (mm)0.32 0.27 0.19
 
Data collection
DiffractometerBruker X8 APEX
Absorption correctionMulti-scan (SADABS; Bruker, 2009)
T min, T max 0.574, 0.748
No. of measured, independent and observed [I > 2(I)] reflections11327, 2407, 2305
R int 0.023
(sin /)max (1)0.746
 
Refinement
R[F 2 > 2(F 2)], wR(F 2), S 0.019, 0.052, 1.11
No. of reflections2407
No. of parameters127
H-atom treatmentH-atom parameters constrained
max, min (e 3)0.94, 0.84

Computer programs: APEX2 and SAINT (Bruker, 2009 ▸), SHELXS97 and SHELXL97 (Sheldrick, 2008 ▸), ORTEP-3 for Windows (Farrugia, 2012 ▸), DIAMOND (Brandenburg, 2006 ▸) and publCIF (Westrip, 2010 ▸).

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989015000341/wm5102sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015000341/wm5102Isup2.hkl CCDC reference: 1042563 Additional supporting information: crystallographic information; 3D view; checkCIF report
Mn2Zn(PO4)2·H2OF(000) = 736
Mr = 383.21Dx = 3.688 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 2407 reflections
a = 8.1784 (2) Åθ = 2.8–32.0°
b = 10.1741 (2) ŵ = 7.54 mm1
c = 9.0896 (2) ÅT = 296 K
β = 114.142 (1)°Parallelepiped, off-white
V = 690.17 (3) Å30.32 × 0.27 × 0.19 mm
Z = 4
Bruker X8 APEX diffractometer2407 independent reflections
Radiation source: fine-focus sealed tube2305 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.023
φ and ω scansθmax = 32.0°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −12→12
Tmin = 0.574, Tmax = 0.748k = −14→15
11327 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.019Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.052H-atom parameters constrained
S = 1.11w = 1/[σ2(Fo2) + (0.0248P)2 + 1.0141P] where P = (Fo2 + 2Fc2)/3
2407 reflections(Δ/σ)max = 0.001
127 parametersΔρmax = 0.94 e Å3
0 restraintsΔρmin = −0.84 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against all reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on all data will be even larger.
xyzUiso*/Ueq
Mn10.88638 (3)0.35884 (3)0.46580 (3)0.00768 (6)
Mn20.48057 (3)0.38305 (3)0.21880 (3)0.00726 (6)
Zn10.12609 (3)0.62028 (2)0.06179 (2)0.00934 (6)
P10.70438 (5)0.08456 (4)0.32706 (5)0.00553 (8)
P20.38560 (5)0.67442 (4)0.36388 (5)0.00613 (8)
O10.58212 (17)0.03301 (13)0.40831 (15)0.0102 (2)
O20.87050 (16)0.15076 (13)0.45546 (15)0.0094 (2)
O30.59293 (17)0.18429 (12)0.19887 (15)0.0092 (2)
O40.76145 (17)−0.03217 (12)0.25178 (15)0.0092 (2)
O50.23736 (18)0.77279 (13)0.26723 (16)0.0123 (2)
O60.36400 (17)0.63194 (13)0.51688 (15)0.0104 (2)
O70.57269 (16)0.73311 (13)0.41028 (15)0.0110 (2)
O80.35411 (17)0.55914 (13)0.24330 (15)0.0107 (2)
O90.88135 (18)0.58568 (14)0.57419 (16)0.0130 (2)
H10.78760.62030.49230.019*
H20.87930.59690.67310.019*
U11U22U33U12U13U23
Mn10.00519 (11)0.00776 (11)0.00860 (11)−0.00070 (8)0.00129 (8)0.00274 (8)
Mn20.00657 (11)0.00704 (11)0.00777 (11)−0.00016 (8)0.00254 (9)−0.00025 (8)
Zn10.00839 (10)0.00949 (10)0.00884 (9)0.00028 (6)0.00219 (7)0.00093 (6)
P10.00538 (16)0.00594 (17)0.00519 (16)0.00046 (13)0.00209 (13)−0.00030 (13)
P20.00556 (16)0.00676 (17)0.00569 (16)0.00008 (13)0.00193 (13)−0.00044 (13)
O10.0107 (5)0.0111 (5)0.0126 (5)0.0015 (4)0.0087 (5)0.0025 (4)
O20.0079 (5)0.0105 (5)0.0073 (5)−0.0020 (4)0.0008 (4)−0.0025 (4)
O30.0099 (5)0.0080 (5)0.0081 (5)0.0022 (4)0.0020 (4)0.0013 (4)
O40.0083 (5)0.0091 (5)0.0099 (5)0.0017 (4)0.0033 (4)−0.0027 (4)
O50.0121 (5)0.0135 (6)0.0108 (5)0.0070 (5)0.0041 (4)0.0035 (4)
O60.0106 (5)0.0137 (6)0.0071 (5)−0.0006 (4)0.0038 (4)0.0016 (4)
O70.0081 (5)0.0129 (6)0.0120 (5)−0.0031 (4)0.0041 (4)−0.0030 (4)
O80.0107 (5)0.0093 (5)0.0099 (5)0.0011 (4)0.0021 (4)−0.0035 (4)
O90.0109 (5)0.0181 (6)0.0106 (5)0.0020 (5)0.0051 (4)0.0007 (5)
Mn1—O6i2.1191 (13)Zn1—O1vi2.0242 (13)
Mn1—O22.1208 (14)Zn1—O1viii2.0347 (12)
Mn1—O3ii2.1464 (12)Zn1—O52.3093 (14)
Mn1—O9iii2.1504 (14)P1—O31.5327 (13)
Mn1—O4iv2.1556 (13)P1—O41.5355 (13)
Mn1—O92.5163 (15)P1—O21.5377 (13)
Mn2—O82.1254 (13)P1—O11.5570 (13)
Mn2—O5v2.1533 (13)P2—O71.5322 (13)
Mn2—O4iv2.1921 (13)P2—O61.5340 (13)
Mn2—O2vi2.2126 (13)P2—O51.5401 (13)
Mn2—O6i2.2166 (13)P2—O81.5532 (13)
Mn2—O32.2590 (13)O9—H10.8939
Zn1—O7vii1.9546 (13)O9—H20.9131
Zn1—O82.0174 (13)
O6i—Mn1—O290.23 (5)O4iv—Mn2—O387.66 (5)
O6i—Mn1—O3ii109.27 (5)O2vi—Mn2—O376.87 (5)
O2—Mn1—O3ii81.31 (5)O6i—Mn2—O387.34 (5)
O6i—Mn1—O9iii161.48 (5)O7vii—Zn1—O8132.60 (5)
O2—Mn1—O9iii107.27 (5)O7vii—Zn1—O1vi100.19 (6)
O3ii—Mn1—O9iii80.06 (5)O8—Zn1—O1vi99.81 (5)
O6i—Mn1—O4iv81.32 (5)O7vii—Zn1—O1viii117.98 (5)
O2—Mn1—O4iv118.14 (5)O8—Zn1—O1viii107.48 (5)
O3ii—Mn1—O4iv158.49 (5)O1vi—Zn1—O1viii80.41 (5)
O9iii—Mn1—O4iv84.99 (5)O7vii—Zn1—O587.57 (5)
O6i—Mn1—O976.07 (5)O8—Zn1—O567.61 (5)
O2—Mn1—O9157.28 (5)O1vi—Zn1—O5167.20 (5)
O3ii—Mn1—O986.18 (5)O1viii—Zn1—O5105.05 (5)
O9iii—Mn1—O989.00 (5)O3—P1—O4111.58 (7)
O4iv—Mn1—O978.15 (5)O3—P1—O2110.68 (7)
O8—Mn2—O5v89.03 (5)O4—P1—O2109.99 (7)
O8—Mn2—O4iv98.10 (5)O3—P1—O1106.62 (7)
O5v—Mn2—O4iv167.53 (5)O4—P1—O1108.79 (7)
O8—Mn2—O2vi104.14 (5)O2—P1—O1109.08 (7)
O5v—Mn2—O2vi90.14 (5)O7—P2—O6109.42 (7)
O4iv—Mn2—O2vi97.96 (5)O7—P2—O5111.62 (8)
O8—Mn2—O6i91.85 (5)O6—P2—O5110.15 (7)
O5v—Mn2—O6i91.25 (5)O7—P2—O8110.32 (7)
O4iv—Mn2—O6i78.36 (5)O6—P2—O8112.31 (8)
O2vi—Mn2—O6i163.97 (5)O5—P2—O8102.92 (7)
O8—Mn2—O3173.90 (5)H1—O9—H2114.6
O5v—Mn2—O384.95 (5)
D—H···AD—HH···AD···AD—H···A
O9—H1···O70.891.972.7866 (19)151
O9—H2···O5ix0.912.162.8687 (19)134
O9—H2···O1ii0.912.483.0494 (19)120
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