Literature DB >> 25875287

Automated CT-based segmentation and quantification of total intracranial volume.

Carlos Aguilar1, Kaijsa Edholm2,3, Andrew Simmons4,5, Lena Cavallin2,3, Susanne Muller2,3, Ingmar Skoog6, Elna-Marie Larsson7, Rimma Axelsson2,3, Lars-Olof Wahlund8, Eric Westman8.   

Abstract

OBJECTIVES: To develop an algorithm to segment and obtain an estimate of total intracranial volume (tICV) from computed tomography (CT) images.
MATERIALS AND METHODS: Thirty-six CT examinations from 18 patients were included. Ten patients were examined twice the same day and eight patients twice six months apart (these patients also underwent MRI). The algorithm combines morphological operations, intensity thresholding and mixture modelling. The method was validated against manual delineation and its robustness assessed from repeated imaging examinations. Using automated MRI software, the comparability with MRI was investigated. Volumes were compared based on average relative volume differences and their magnitudes; agreement was shown by a Bland-Altman analysis graph.
RESULTS: We observed good agreement between our algorithm and manual delineation of a trained radiologist: the Pearson's correlation coefficient was r = 0.94, tICVml[manual] = 1.05 × tICVml[automated] - 33.78 (R(2) = 0.88). Bland-Altman analysis showed a bias of 31 mL and a standard deviation of 30 mL over a range of 1265 to 1526 mL.
CONCLUSIONS: tICV measurements derived from CT using our proposed algorithm have shown to be reliable and consistent compared to manual delineation. However, it appears difficult to directly compare tICV measures between CT and MRI. KEY POINTS: • Automated estimation of tICV is in good agreement with manual tracing. • Consistent tICV estimations from repeated measurements demonstrate the robustness of the algorithm. • Automatically segmented volumes seem less variable than those from manual tracing. • Unbiased and automated tlCV estimation is possible from CT.

Entities:  

Keywords:  Computed tomography; Magnetic resonance imaging; Maximum likelihood estimator; Skull stripping; Total intracranial volume

Mesh:

Year:  2015        PMID: 25875287     DOI: 10.1007/s00330-015-3747-7

Source DB:  PubMed          Journal:  Eur Radiol        ISSN: 0938-7994            Impact factor:   5.315


  24 in total

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2.  An optimized method for estimating intracranial volume from magnetic resonance images.

Authors:  J Eritaia; S J Wood; G W Stuart; N Bridle; P Dudgeon; P Maruff; D Velakoulis; C Pantelis
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4.  Head size may modify the impact of white matter lesions on dementia.

Authors:  Ingmar Skoog; Pernille J Olesen; Kaj Blennow; Bo Palmertz; Sterling C Johnson; Erin D Bigler
Journal:  Neurobiol Aging       Date:  2011-03-21       Impact factor: 4.673

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Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

6.  Bayesian analysis of neuroimaging data in FSL.

Authors:  Mark W Woolrich; Saad Jbabdi; Brian Patenaude; Michael Chappell; Salima Makni; Timothy Behrens; Christian Beckmann; Mark Jenkinson; Stephen M Smith
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7.  Brain changes in Alzheimer's disease patients with implanted encapsulated cells releasing nerve growth factor.

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Journal:  J Alzheimers Dis       Date:  2015       Impact factor: 4.472

8.  Fully automated segmentation of cerebrospinal fluid in computed tomography.

Authors:  U E Ruttimann; E M Joyce; D E Rio; M J Eckardt
Journal:  Psychiatry Res       Date:  1993-06       Impact factor: 3.222

9.  The use of MRI, CT and lumbar puncture in dementia diagnostics: data from the SveDem Registry.

Authors:  Farshad Falahati; Seyed-Mohammad Fereshtehnejad; Dorota Religa; Lars-Olof Wahlund; Eric Westman; Maria Eriksdotter
Journal:  Dement Geriatr Cogn Disord       Date:  2014-10-24       Impact factor: 2.959

10.  Estimated maximal and current brain volume predict cognitive ability in old age.

Authors:  Natalie A Royle; Tom Booth; Maria C Valdés Hernández; Lars Penke; Catherine Murray; Alan J Gow; Susana Muñoz Maniega; John Starr; Mark E Bastin; Ian J Deary; Joanna M Wardlaw
Journal:  Neurobiol Aging       Date:  2013-07-11       Impact factor: 4.673

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1.  Simultaneous total intracranial volume and posterior fossa volume estimation using multi-atlas label fusion.

Authors:  Yuankai Huo; Andrew J Asman; Andrew J Plassard; Bennett A Landman
Journal:  Hum Brain Mapp       Date:  2016-10-11       Impact factor: 5.038

2.  A Method to Estimate Brain Volume from Head CT Images and Application to Detect Brain Atrophy in Alzheimer Disease.

Authors:  V Adduru; S A Baum; C Zhang; M Helguera; R Zand; M Lichtenstein; C J Griessenauer; A M Michael
Journal:  AJNR Am J Neuroradiol       Date:  2020-01-30       Impact factor: 3.825

3.  A preclinical micro-computed tomography database including 3D whole body organ segmentations.

Authors:  Stefanie Rosenhain; Zuzanna A Magnuska; Grace G Yamoah; Wa'el Al Rawashdeh; Fabian Kiessling; Felix Gremse
Journal:  Sci Data       Date:  2018-12-18       Impact factor: 6.444

4.  Comparison of Two-Dimensional- and Three-Dimensional-Based U-Net Architectures for Brain Tissue Classification in One-Dimensional Brain CT.

Authors:  Meera Srikrishna; Rolf A Heckemann; Joana B Pereira; Giovanni Volpe; Anna Zettergren; Silke Kern; Eric Westman; Ingmar Skoog; Michael Schöll
Journal:  Front Comput Neurosci       Date:  2022-01-10       Impact factor: 2.380

5.  Machine learning-based automatic estimation of cortical atrophy using brain computed tomography images.

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  5 in total

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