Literature DB >> 25872956

Herbinix hemicellulosilytica gen. nov., sp. nov., a thermophilic cellulose-degrading bacterium isolated from a thermophilic biogas reactor.

Daniela E Koeck1, Wolfgang Ludwig1, Gerhard Wanner2, Vladimir V Zverlov1,3, Wolfgang Liebl1, Wolfgang H Schwarz1.   

Abstract

Phenotypic and phylogenetic studies were performed on new isolates of a novel Gram-stain-positive, anaerobic, non-sporulating, rod-shaped bacterium isolated from a thermophilic biogas plant. The novel organisms were able to degrade crystalline cellulose. 16S rRNA gene comparative sequence analysis demonstrated that the isolates formed a hitherto unknown subline within the family Lachnospiraceae. As a representative of the whole group of isolates, strain T3/55T was further characterized. The closest relative of T3/55T among the taxa with validly published names is Mobilitalea sibirica, sharing 93.9% 16S rRNA gene sequence similarity. Strain T3/55T was catalase-negative, indole-negative, and produced acetate, ethanol and propionic acid as major end products from cellulose metabolism. The major cellular fatty acids (>1%) were 16 : 0 dimethyl acetal, 16 : 0 fatty acid methyl ester and 16 : 0 aldehyde. The DNA G+C content was 36.6 mol%. A novel genus and species, Herbinix hemicellulosilytica gen. nov., sp. nov., is proposed based on phylogenetic analysis and physiological properties of the novel isolate. Strain T3/55T ( = DSM 29228T = CECT 8801T), represents the type strain of Herbinix hemicellulosilytica gen. nov., sp. nov.

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Year:  2015        PMID: 25872956     DOI: 10.1099/ijs.0.000264

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  17 in total

1.  Biochemical and Structural Characterization of Thermostable GH159 Glycoside Hydrolases Exhibiting α-L-Arabinofuranosidase Activity.

Authors:  Melanie Baudrexl; Tarik Fida; Berkay Berk; Wolfgang H Schwarz; Vladimir V Zverlov; Michael Groll; Wolfgang Liebl
Journal:  Front Mol Biosci       Date:  2022-06-29

Review 2.  Management of microbial enzymes for biofuels and biogas production by using metagenomic and genome editing approaches.

Authors:  J Rajesh Banu; Gopalakrishnan Kumar; Indranil Chattopadhyay
Journal:  3 Biotech       Date:  2021-09-08       Impact factor: 2.893

3.  Deep metagenome and metatranscriptome analyses of microbial communities affiliated with an industrial biogas fermenter, a cow rumen, and elephant feces reveal major differences in carbohydrate hydrolysis strategies.

Authors:  Simon Güllert; Martin A Fischer; Dmitrij Turaev; Britta Noebauer; Nele Ilmberger; Bernd Wemheuer; Malik Alawi; Thomas Rattei; Rolf Daniel; Ruth A Schmitz; Adam Grundhoff; Wolfgang R Streit
Journal:  Biotechnol Biofuels       Date:  2016-06-07       Impact factor: 6.040

4.  acdc - Automated Contamination Detection and Confidence estimation for single-cell genome data.

Authors:  Markus Lux; Jan Krüger; Christian Rinke; Irena Maus; Andreas Schlüter; Tanja Woyke; Alexander Sczyrba; Barbara Hammer
Journal:  BMC Bioinformatics       Date:  2016-12-20       Impact factor: 3.169

5.  Fusimonas intestini gen. nov., sp. nov., a novel intestinal bacterium of the family Lachnospiraceae associated with diabetes in mice.

Authors:  Hiroyuki Kusada; Keishi Kameyama; Xian-Ying Meng; Yoichi Kamagata; Hideyuki Tamaki
Journal:  Sci Rep       Date:  2017-12-22       Impact factor: 4.379

Review 6.  Cellulases: From Bioactivity to a Variety of Industrial Applications.

Authors:  Uroosa Ejaz; Muhammad Sohail; Abdelaziz Ghanemi
Journal:  Biomimetics (Basel)       Date:  2021-07-05

7.  Complete Genome Sequence of Herbinix luporum SD1D, a New Cellulose-Degrading Bacterium Isolated from a Thermophilic Biogas Reactor.

Authors:  Daniela E Koeck; Irena Maus; Daniel Wibberg; Anika Winkler; Vladimir V Zverlov; Wolfgang Liebl; Alfred Pühler; Wolfgang H Schwarz; Andreas Schlüter
Journal:  Genome Announc       Date:  2016-07-21

8.  Draft Genome Sequence of Propionispora sp. Strain 2/2-37, a New Xylan-Degrading Bacterium Isolated from a Mesophilic Biogas Reactor.

Authors:  Daniela E Koeck; Irena Maus; Daniel Wibberg; Anika Winkler; Vladimir V Zverlov; Wolfgang Liebl; Alfred Pühler; Wolfgang H Schwarz; Andreas Schlüter
Journal:  Genome Announc       Date:  2016-06-23

9.  Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates.

Authors:  Irena Maus; Daniela E Koeck; Katharina G Cibis; Sarah Hahnke; Yong S Kim; Thomas Langer; Jana Kreubel; Marcel Erhard; Andreas Bremges; Sandra Off; Yvonne Stolze; Sebastian Jaenicke; Alexander Goesmann; Alexander Sczyrba; Paul Scherer; Helmut König; Wolfgang H Schwarz; Vladimir V Zverlov; Wolfgang Liebl; Alfred Pühler; Andreas Schlüter; Michael Klocke
Journal:  Biotechnol Biofuels       Date:  2016-08-11       Impact factor: 6.040

10.  Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes.

Authors:  Irena Maus; Andreas Bremges; Yvonne Stolze; Sarah Hahnke; Katharina G Cibis; Daniela E Koeck; Yong S Kim; Jana Kreubel; Julia Hassa; Daniel Wibberg; Aaron Weimann; Sandra Off; Robbin Stantscheff; Vladimir V Zverlov; Wolfgang H Schwarz; Helmut König; Wolfgang Liebl; Paul Scherer; Alice C McHardy; Alexander Sczyrba; Michael Klocke; Alfred Pühler; Andreas Schlüter
Journal:  Biotechnol Biofuels       Date:  2017-11-13       Impact factor: 6.040

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