Literature DB >> 25863787

Bioinformatics and Microarray Data Analysis on the Cloud.

Barbara Calabrese1, Mario Cannataro2.   

Abstract

High-throughput platforms such as microarray, mass spectrometry, and next-generation sequencing are producing an increasing volume of omics data that needs large data storage and computing power. Cloud computing offers massive scalable computing and storage, data sharing, on-demand anytime and anywhere access to resources and applications, and thus, it may represent the key technology for facing those issues. In fact, in the recent years it has been adopted for the deployment of different bioinformatics solutions and services both in academia and in the industry. Although this, cloud computing presents several issues regarding the security and privacy of data, that are particularly important when analyzing patients data, such as in personalized medicine. This chapter reviews main academic and industrial cloud-based bioinformatics solutions; with a special focus on microarray data analysis solutions and underlines main issues and problems related to the use of such platforms for the storage and analysis of patients data.

Entities:  

Keywords:  Bioinformatics; Cloud computing; Microarray data analysis

Mesh:

Year:  2016        PMID: 25863787     DOI: 10.1007/7651_2015_236

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  3 in total

1.  Cloud-based interactive analytics for terabytes of genomic variants data.

Authors:  Cuiping Pan; Gregory McInnes; Nicole Deflaux; Michael Snyder; Jonathan Bingham; Somalee Datta; Philip S Tsao
Journal:  Bioinformatics       Date:  2017-12-01       Impact factor: 6.937

2.  Framework for Parallel Preprocessing of Microarray Data Using Hadoop.

Authors:  Amirhossein Sahlabadi; Ravie Chandren Muniyandi; Mahdi Sahlabadi; Hossein Golshanbafghy
Journal:  Adv Bioinformatics       Date:  2018-03-29

3.  Genomics Virtual Laboratory: A Practical Bioinformatics Workbench for the Cloud.

Authors:  Enis Afgan; Clare Sloggett; Nuwan Goonasekera; Igor Makunin; Derek Benson; Mark Crowe; Simon Gladman; Yousef Kowsar; Michael Pheasant; Ron Horst; Andrew Lonie
Journal:  PLoS One       Date:  2015-10-26       Impact factor: 3.240

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.