Literature DB >> 25862080

Z-scan fluorescence profile deconvolution of cytosolic and membrane-associated protein populations.

Elizabeth M Smith1, Jared Hennen1, Yan Chen2, Joachim D Mueller3.   

Abstract

This study introduces a technique that characterizes the spatial distribution of peripheral membrane proteins that associate reversibly with the plasma membrane. An axial scan through the cell generates a z-scan intensity profile of a fluorescently labeled peripheral membrane protein. This profile is analytically separated into membrane and cytoplasmic components by accounting for both the cell geometry and the point spread function. We experimentally validated the technique and characterized both the resolvability and stability of z-scan measurements. Furthermore, using the cellular brightness of green fluorescent protein, we were able to convert the fluorescence intensities into concentrations at the membrane and in the cytoplasm. We applied the technique to study the translocation of the pleckstrin homology domain of phospholipase C delta 1 labeled with green fluorescent protein on ionomycin treatment. Analysis of the z-scan fluorescence profiles revealed protein-specific cell height changes and allowed for comparison between the observed fluorescence changes and predictions based on the cellular surface area-to-volume ratio. The quantitative capability of z-scan fluorescence profile deconvolution offers opportunities for investigating peripheral membrane proteins in the living cell that were previously not accessible.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Brightness; Peripheral membrane protein; Phospholipase C; Pleckstrin homology domain; Point spread function; Translocation

Mesh:

Substances:

Year:  2015        PMID: 25862080      PMCID: PMC4438313          DOI: 10.1016/j.ab.2015.03.030

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  37 in total

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3.  Myristoylation-Dependent Palmitoylation of the Receptor Tyrosine Kinase Adaptor FRS2α.

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4.  Sensitive Detection of Protein Binding to the Plasma Membrane with Dual-Color Z-Scan Fluorescence.

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5.  Differentiating Luminal and Membrane-Associated Nuclear Envelope Proteins.

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  9 in total

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