Literature DB >> 25858434

Emerging OP354-Like P[8] Rotaviruses Have Rapidly Dispersed from Asia to Other Continents.

Mark Zeller1, Elisabeth Heylen2, Susan Damanka3, Corinna Pietsch4, Celeste Donato5, Tsutomu Tamura6, Ruta Kulkarni7, Ritu Arora7, Nigel Cunliffe8, Leena Maunula9, Christiaan Potgieter10, Sana Tamim11, Sarah De Coster2, Elena Zhirakovskaya12, Salwa Bdour13, Helen O'Shea14, Carl D Kirkwood5, Mapaseka Seheri15, Martin Monene Nyaga15, Jeffrey Mphahlele15, Shobha D Chitambar7, Ron Dagan16, George Armah3, Nina Tikunova12, Marc Van Ranst2, Jelle Matthijnssens1.   

Abstract

The majority of human group A rotaviruses possess the P[8] VP4 genotype. Recently, a genetically distinct subtype of the P[8] genotype, also known as OP354-like P[8] or lineage P[8]-4, emerged in several countries. However, it is unclear for how long the OP354-like P[8] gene has been circulating in humans and how it has spread. In a global collaborative effort 98 (near-)complete OP354-like P[8] VP4 sequences were obtained and used for phylogeographic analysis to determine the viral migration patterns. During the sampling period, 1988-2012, we found that South and East Asia acted as a source from which strains with the OP354-like P[8] gene were seeded to Africa, Europe, and North America. The time to the most recent common ancestor (TMRCA) of all OP354-like P[8] genes was estimated at 1987. However, most OP354-like P[8] strains were found in three main clusters with TMRCAs estimated between 1996 and 2001. The VP7 gene segment of OP354-like P[8] strains showed evidence of frequent reassortment, even in localized epidemics, suggesting that OP354-like P[8] genes behave in a similar manner on the evolutionary level as other P[8] subtypes. The results of this study suggest that OP354-like P[8] strains have been able to disperse globally in a relatively short time period. This, in combination with a relatively large genetic distance to other P[8] subtypes, might result in a lower vaccine effectiveness, underscoring the need for a continued surveillance of OP354-like P[8] strains, especially in countries where rotavirus vaccination programs are in place.
© The Author 2015. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  OP354-like P[8]; emerging viruses; reassortment; rotaviruses

Mesh:

Year:  2015        PMID: 25858434      PMCID: PMC4833074          DOI: 10.1093/molbev/msv088

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  46 in total

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