Literature DB >> 25857928

Improving confidence in environmental DNA species detection.

Christopher L Jerde1, Andrew R Mahon.   

Abstract

Will we catch fish today? Our grandfathers' responses were usually something along the lines of, 'Probably. I've caught them here before'. One of the foundations of ecology is identifying which species are present, and where. This informs our understanding of species richness patterns, spread of invasive species, and loss of threatened and endangered species due to environmental change. However, our understanding is often lacking, particularly in aquatic environments where biodiversity remains hidden below the water's surface. The emerging field of metagenetic species surveillance is aiding our ability to rapidly determine which aquatic species are present, and where. In this issue of Molecular Ecology Resources, Ficetola et al. () provide a framework for metagenetic environmental DNA surveillance to foster the confidence of our grandfathers' fishing prowess by more rigorously evaluating the replication levels necessary to quantify detection errors and ultimately improving our confidence in aquatic species presence.
© 2015 John Wiley & Sons Ltd.

Keywords:  eDNA; error; natural resource management; occupancy; species richness

Mesh:

Year:  2015        PMID: 25857928     DOI: 10.1111/1755-0998.12377

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  5 in total

1.  Modelling the transport of environmental DNA through a porous substrate using continuous flow-through column experiments.

Authors:  Arial J Shogren; Jennifer L Tank; Elizabeth A Andruszkiewicz; Brett Olds; Christopher Jerde; Diogo Bolster
Journal:  J R Soc Interface       Date:  2016-06       Impact factor: 4.118

2.  Persistence of marine fish environmental DNA and the influence of sunlight.

Authors:  Elizabeth A Andruszkiewicz; Lauren M Sassoubre; Alexandria B Boehm
Journal:  PLoS One       Date:  2017-09-15       Impact factor: 3.240

3.  Controls on eDNA movement in streams: Transport, Retention, and Resuspension.

Authors:  Arial J Shogren; Jennifer L Tank; Elizabeth Andruszkiewicz; Brett Olds; Andrew R Mahon; Christopher L Jerde; Diogo Bolster
Journal:  Sci Rep       Date:  2017-07-11       Impact factor: 4.379

4.  Assessing vertebrate biodiversity in a kelp forest ecosystem using environmental DNA.

Authors:  Jesse A Port; James L O'Donnell; Ofelia C Romero-Maraccini; Paul R Leary; Steven Y Litvin; Kerry J Nickols; Kevan M Yamahara; Ryan P Kelly
Journal:  Mol Ecol       Date:  2015-12-24       Impact factor: 6.185

5.  What do you mean by false positive.

Authors:  John A Darling; Christopher L Jerde; Adam J Sepulveda
Journal:  Environ DNA       Date:  2020-11-25
  5 in total

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