| Literature DB >> 25849029 |
Charles P-A Bourque1, Mahmoud Bayat2.
Abstract
Mapping landscape variation in tree species richness (SR) is essential to the long term management and conservation of forest ecosystems. The current study examines the prospect of mapping field assessments of SR in a high-elevation, deciduous forest in northern Iran as a function of 16 biophysical variables representative of the area's unique physiography, including topography and coastal placement, biophysical environment, and forests. Basic to this study is the development of moderate-resolution biophysical surfaces and associated plot-estimates for 202 permanent sampling plots. The biophysical variables include: (i) three topographic variables generated directly from the area's digital terrain model; (ii) four ecophysiologically-relevant variables derived from process models or from first principles; and (iii) seven variables of Landsat-8-acquired surface reflectance and two, of surface radiance. With symbolic regression, it was shown that only four of the 16 variables were needed to explain 85% of observed plot-level variation in SR (i.e., wind velocity, surface reflectance of blue light, and topographic wetness indices representative of soil water content), yielding mean-absolute and root-mean-squared error of 0.50 and 0.78, respectively. Overall, localised calculations of wind velocity and surface reflectance of blue light explained about 63% of observed variation in SR, with wind velocity accounting for 51% of that variation. The remaining 22% was explained by linear combinations of soil-water-related topographic indices and associated thresholds. In general, SR and diversity tended to be greatest for plots dominated by Carpinus betulus (involving ≥ 33% of all trees in a plot), than by Fagus orientalis (median difference of one species). This study provides a significant step towards describing landscape variation in SR as a function of modelled and satellite-based information and symbolic regression. Methods in this study are sufficiently general to be applicable to the characterisation of SR in other forested regions of the world, providing plot-scale data are available for model generation.Entities:
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Year: 2015 PMID: 25849029 PMCID: PMC4388521 DOI: 10.1371/journal.pone.0121172
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Sixteen variables considered in the analysis of tree species richness in the Kheyrud Forest of northern Iran.
| Variable | Derivation and/or source | Comments |
|---|---|---|
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| Slope can be estimated directly from finite-difference evaluations of DTM-height data with GIS; the 10-m resolution DTM is based on a bi-cubic interpolation of the 30-m GDEM v. 2 ( | Slope is used in this study as an indicator for the potential of mass wasting occurring in steep terrain. Catastrophic slope failures can lead to sizeable debris flows and landslides that can accentuate local within-site heterogeneity and promote species proliferation during site recovery [ |
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| Based on algorithms described in Murphy et al. and Rennó et al. [ | HNDP ( |
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| Based on TWI = ln(As/tan(β)), where As is the specific contributing area and tan(β) is the slope along the flow direction (o; [ | Topography redistributes precipitation and soil water and, as a result, surfaces of TWI ( |
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| Derived from LanDSET-model calculations [ | Solar radiation ( |
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| Vertical variation in temperature is based on an assumed environmental temperature lapse rate of 6.5°C km-1 [ | Physiological variable ( |
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| Determined in the same way as described in Bourque & Matin (2012) [ | Physiological variable ( |
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| Modelled according to the full 3D Navier-Stokes equations, incorporating the effects of atmospheric turbulence and thermal processes [ | Wind velocities ( |
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| Landsat-8 30-mresolution multi-spectral imagery ( | Surface reflectance differs between plants of different species [ |
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| Landsat-8 30-mresolution multi-spectral imagery ( | Thermal infrared emissions can be used to describe variation in land surface temperatures, as well as assist in the differentiation of plant species [ |
All surfaces are calculated or resampled at 10-m resolution; illustrations of some of these surfaces are provided in Figs. 1 and 3.
Fig 1Modelled biophysical surfaces.
(a) elevation (m AMSL), (b) ground height above nearest drainage point (HNDP, in m), (c) topographic wetness index (non-dimensional), (d) growing-season accumulated cloud-free insolation (MJ m-2), (e) mean growing-season air temperature (°C), and (f) Landsat image of the study area. Variation in colour corresponds to variation in the various variables.
Fig 3Modelled wind.
(a) direction (° from true north) and (b) velocity (m s-1; background colours) for the study area. Coloured circles in (b), representing individual plots, vary in size according to observed tree species richness; large circles represent plots with high tree species richness (e.g., SR = 7 species per 0.1-ha plot) and small circles, low species richness (e.g., SR = 1 species per 0.1-ha plot). Plot tree-species dominance (accounting for ≥ 33% of all trees in a plot) is labelled by colour.
Fig 4Study site in northern Iran.
(a) inset map and (b) network of forest-inventory plots central to the study. Location of the port city of Noushahr in the inset map is indicated next to the plot network. Coloured circles in (b), representing individual plots, vary in size according to observed tree species richness; large circles represent plots with high tree species richness (e.g., SR = 7 species per 0.1-ha plot) and small circles, low species richness (e.g., SR = 1 species per 0.1-ha plot). Plot tree-species dominance (accounting for ≥ 33% of all trees in a plot) is labelled by colour. Boxplots in (c) give species diversity as a function of the Shannon-Weaver and Simpson’s index for Fagus orientalis- and Carpinus betulus-dominated plots, covering 97.5% of all plots considered (197 of 202 plots). The remaining plots are dominated by Acer velutinum (3 plots), Acer campestre (1 plot), and Alnus subcordata (1 plot). The median and mean of individual distributions are indicated by the solid and dashed lines within the boxes. The 25th and 75th percentile of the data are given as the lower and upper boundaries of the box; the 10th and 90th percentile are given at the lower and upper limits of the whiskers. Values smaller or larger than the 10th and 90th percentile are indicated as black circles.
Fig 2Climatological summaries for Noushahr station.
(a) air temperature (°C), precipitation (mm), (b) relative humidity (%), and (c) wind velocity (m s-1) and direction (° from true north) based on climate data recorded from 1977 through 2005. The bars in all instances represent the level of data dispersion for individual variables. Mean annual wind direction is 322.1° (±47.9°, standard deviation) from true north; its value varies to 332.6° (±37.5°) during the growing period. Near-surface growing-period average wind velocity is about 0.64 m s-1 (±0.28 m s-1).
Life traits of dominant tree species in 97.5% of sampling plots; a compilation of internet sources, e.g., Flora ii. in Persia webpage (consult www.iranicaonline.org/articles/flora-ii-in-persia, last accessed on June 2014), and Tabari et al. (2007) and Heshmati (2007) [44,45].
| Species | Elevation (m AMSL) | Light Requirement | Soil Moisture | Comments |
|---|---|---|---|---|
|
| Part of the cold-deciduous montane forests; can be found growing between 700–2,000; naturally-growing dense stands are found at 1,000–2,000 and the better stands at 900–1,500 | Tolerant of heavy shade, while young | Need a well-drained soil and regular wetting; large trees can withstand the occasional drought; saplings are more resistant to drought | Wind pollinated; late frost, early heavy snow, and direct sunlight can damage saplings |
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| Part of the cold-deciduous lowland forests; can occur in greater numbers at lower elevations; can also be found growing at higher elevations between 700–1,800 | Full sunlight to partial shade; warm climate | Occasionally moist, well-drained soils; tolerant to drought | Seed dispersal by wind currents |
Fig 5Sampling-plot averages of site and environmental values for Fagus orientalis- and Carpinus betulus-dominated plots.
All distributions were statistically different from normal, based on Shapiro-Wilk normality tests and p-values < 0.05. Plots labelled by red asterisks identify statistically-significant differences between medians (based on rank-sum tests and p-values < 0.001) for values associated with Fagus orientalis- and Carpinus betulus-dominated plots.
Relative contribution of wind velocity (WND; m s-1), surface reflectance of blue light (B2; non-dimensional), ground height above nearest drainage point (HNDP; m), and topographic wetness index (TWI; non-dimensional) in a linear description of spatial variation in tree species richness (number of trees per 0.1-ha plot).
| Independent Variable | Individual contribution (%) | ||||||
|---|---|---|---|---|---|---|---|
| Solution | r2 a | WND | B2 | HNDP | TWI | ||
| 1 | 0.512 | × | WND | 51.2 | |||
| 2 | 0.626 | × | × | B2 | 11.4 | ||
| 3 | 0.708 | × | × | × | HNDP | 8.2 | |
| 4 | 0.775 | × | × | × | × | TWI | 6.7 |
| 5 | 0.849 | × | × | × | × | Linear combinations + Thresholds | 7.4 |
“×” marks the variables included in the various equations generated with symbolic regression. Solutions 1–4 are based on linear combinations of variables identified in the Table. Solution 5 is similar to solution 4, except solution 5 incorporates thresholds with respect to the portion of HNDP and TWI that best describes the area’s distribution of soil water content. The unused variables in Table 1 had little to no role in explaining the variation in species richness.
a r2 is based on a plot-level comparison of modelled and corresponding field-based estimates of SR.
Fig 6Contour plot of tree species richness as a function of wind velocity (m s-1; x-axis) and ground height above nearest drainage point (HNDP, m; y-axis).
The arrow in the centre denotes the general increase in tree species richness as wind velocity and HNDP increase linearly simultaneously.
Fig 7Mapped tree species richness derived with equation (1).
Coloured circles, representing individual plots, vary in size according to observed tree species richness; large circles represent plots with high tree species richness (e.g., SR = 7 species per 0.1-ha plot) and small circles, low species richness (e.g., SR = 1 species per 0.1-ha plot). Plot tree-species dominance (accounting for ≥ 33% of all trees in a plot) is labelled according to colour (Fig. 4).
Partial literature review of plant species richness (SR) as a function of environmental heterogeneity; area and scale of application, methods, and results.
| Application Area & Scale | Approach | Results | Source |
|---|---|---|---|
| Majella National Park, Italy; mesoscale, 170 km2 | The study assessed the accuracy of detecting SR in a forest site by combining mid-resolution images from satellite with environmental data of elevation, slope, aspect, and solar radiation in an artificial neural network classifier | Map accuracies obtained for Landsat-TM and ALOS images were 60 and 53%, respectively. Use of environmental data increased accuracies to 91 and 81% | [ |
| Kevo Nature Reserve, north Finland; mesoscale, 362 1-km grid squares | Using generalised linear modelling, multiple regression models of SR were built with a training set of 257 grid squares and 33 environmental variables | The fitted model explained 51% of the variation in total number of vascular plant taxa in the testing set; altitudinal variables were the better predictors of SR | [ |
| Northeast Iberian Peninsula; mesoscale, 100 km2 grid | Relationship between SR and environmental variables was tested by a weighted analysis of variance using generalised linear models | Environmental heterogeneity addressed 67% of the spatial variation in SR | [ |
| Tutuila, American Samoa, South Pacific Ocean; mesoscale, 142 km2 grid | Expressed SR along an elevational gradient from a mountain ridge, mid-slope, to valley position | Chi-square analysis indicated that nine tree species (of a total of 52 species) had strong preference for specific topographic position | [ |
| Two tropical forest sites: (1) a tropical montane cloud forest and (2) a lowland Amazonian forest; microscale, ten 25 m × 25 m plots per forest region | Examined the micro-scale variability in tree SR through a combination of ground-based plot studies and computer-based analyses of 16 terrain characteristics | SR was found to correlate fairly well with slope mean curvature, with high SR found on convex slopes (r2 = 0.73) | [ |
| Cloud forest in Monte de Neblina de Cuyas, northern Peruvian Andes; microscale; study site was situated at altitudes ranging from 2,359–3,012 m AMSL, mostly on a southwest-facing slope | Examined species-habitat associations in three 1-ha plots using the torus-translation method | When topographic and forest structure variables were combined in the definition of habitat, SR with significant plant associations ( | [ |