Literature DB >> 25844470

[Diversity of diazotrophs in the sediments of hypersaline salt and soda lakes analyzed with the use of the nifH gene as a molecular marker].

T P Turova, N V Slobodova, B K Bumazhkin, M V Sukhacheva, D Iu Sorokin.   

Abstract

Phylogenetic analysis of the nifH genes, encoding the Fe protein of the nitrogenas enzymatic complex, was carried out for pure cultures of anoxygenic phototrophic bacteria of diverse origin, as well as for heterotrophic alkaliphilic sulfate reducers isolated from saline and soda lakes. Topology of the nitrogenase tree correlated with that of the 16S rRNAgene tree to a considerable degree; which niade it possible to use the nifH gene as a molecular marker for investigation of diazotrophic bacterialcommunities in silty sediments of saline and sodalakes. Although diazotrophs were revealed in all environmentalsamples, their phylogenetic diversity was relatively low. Sulfate-reducing deltaproteobacteria and photo- and chemotrophicgammaproteobacteria were predominant in samples integrated over sediment thickness. Analysis of samples fromthe upper sediment layers revealed predominance of phototrophic diazotrophs of various phyla, including purple sulfur and nonsulfur proteobacteria, green nonsulfur bacteria, heliobacteria; and cyanobacteria. Some phylotypes could not be identified, probably indicating the presence of bacterial groups which have not yet been studied by conventional microbiological techniques.

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Year:  2014        PMID: 25844470

Source DB:  PubMed          Journal:  Mikrobiologiia        ISSN: 0026-3656


  2 in total

1.  Effect of salinity on diazotrophic activity and microbial composition of phototrophic communities from Bitter-1 soda lake (Kulunda Steppe, Russia).

Authors:  Zorigto Namsaraev; Olga Samylina; Marina Sukhacheva; Gennadii Borisenko; Dimitry Y Sorokin; Tatiana Tourova
Journal:  Extremophiles       Date:  2018-04-16       Impact factor: 2.395

2.  Nitrogen Fixation Activity and Genome Analysis of a Moderately Haloalkaliphilic Anoxygenic Phototrophic Bacterium Rhodovulum tesquicola.

Authors:  Anastasia V Komova; Elizaveta D Bakhmutova; Anna O Izotova; Evelina S Kochetova; Stepan V Toshchakov; Zorigto B Namsaraev; Maxim V Golichenkov; Aleksei A Korzhenkov
Journal:  Microorganisms       Date:  2022-08-09
  2 in total

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