| Literature DB >> 25844249 |
Leandro R S Camargo1, Julio Zukerman-Schpector1, Anna M Deobald2, Antonio L Braga3, Edward R T Tiekink4.
Abstract
In the title compound, C21H17N3OSe, the dihedral angles between the central five-membered ring and the C- and N-bound rings are 17.89 (10) and 42.35 (10)°, respectively, indicating the mol-ecule is twisted. The dihedral angle between theEntities:
Keywords: C—H⋯π interactions; Se⋯O halogen bonding; crystal structure; hydrogen bonding; organoselenium
Year: 2015 PMID: 25844249 PMCID: PMC4350762 DOI: 10.1107/S2056989015003230
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| C21H17N3OSe | |
| Triclinic, | |
| Mo | |
| Cell parameters from 4524 reflections | |
| θ = 2.6–29.2° | |
| α = 81.604 (4)° | µ = 2.16 mm−1 |
| β = 80.006 (4)° | |
| γ = 85.340 (4)° | Prism, colourless |
| 0.30 × 0.20 × 0.10 mm |
| Agilent SuperNova CCD diffractometer | 3548 reflections with |
| Radiation source: SuperNova (Cu) X-ray Source | |
| ω scans | θmax = 27.5°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 6845 measured reflections | |
| 3869 independent reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.002 | |
| 3869 reflections | Δρmax = 0.41 e Å−3 |
| 236 parameters | Δρmin = −0.52 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Se | 0.46182 (3) | 0.71551 (2) | 0.79326 (2) | 0.01503 (7) | |
| O1 | 0.5130 (2) | 0.51326 (12) | 0.68268 (9) | 0.0185 (3) | |
| N1 | 0.8216 (3) | 0.94528 (14) | 0.79605 (10) | 0.0128 (3) | |
| N2 | 1.0599 (3) | 0.96928 (15) | 0.78243 (11) | 0.0154 (3) | |
| N3 | 1.1085 (3) | 1.03509 (15) | 0.70214 (10) | 0.0150 (3) | |
| C1 | 0.4930 (4) | 0.4251 (2) | 0.62080 (14) | 0.0255 (5) | |
| H1A | 0.3570 | 0.4549 | 0.5897 | 0.038* | |
| H1B | 0.4669 | 0.3374 | 0.6533 | 0.038* | |
| H1C | 0.6414 | 0.4227 | 0.5771 | 0.038* | |
| C2 | 0.6840 (3) | 0.48102 (18) | 0.73647 (12) | 0.0164 (4) | |
| C3 | 0.8446 (4) | 0.37256 (18) | 0.73332 (13) | 0.0209 (4) | |
| H3 | 0.8404 | 0.3139 | 0.6916 | 0.025* | |
| C4 | 1.0113 (4) | 0.34994 (19) | 0.79132 (14) | 0.0238 (4) | |
| H4 | 1.1196 | 0.2750 | 0.7897 | 0.029* | |
| C5 | 1.0204 (4) | 0.4358 (2) | 0.85130 (14) | 0.0227 (4) | |
| H5 | 1.1355 | 0.4202 | 0.8905 | 0.027* | |
| C6 | 0.8611 (3) | 0.54507 (19) | 0.85434 (13) | 0.0194 (4) | |
| H6 | 0.8684 | 0.6041 | 0.8956 | 0.023* | |
| C7 | 0.6917 (3) | 0.56852 (17) | 0.79755 (12) | 0.0150 (4) | |
| C8 | 0.5446 (3) | 0.78849 (18) | 0.89132 (12) | 0.0153 (4) | |
| C9 | 0.4431 (4) | 0.73766 (19) | 0.97760 (13) | 0.0194 (4) | |
| H9 | 0.3236 | 0.6758 | 0.9856 | 0.023* | |
| C10 | 0.5126 (4) | 0.7755 (2) | 1.05209 (13) | 0.0223 (4) | |
| H10 | 0.4427 | 0.7386 | 1.1104 | 0.027* | |
| C11 | 0.6845 (4) | 0.8671 (2) | 1.04128 (13) | 0.0224 (4) | |
| H11 | 0.7347 | 0.8922 | 1.0920 | 0.027* | |
| C12 | 0.7825 (4) | 0.92197 (19) | 0.95603 (13) | 0.0182 (4) | |
| H12 | 0.8974 | 0.9863 | 0.9485 | 0.022* | |
| C13 | 0.7135 (3) | 0.88317 (17) | 0.88174 (12) | 0.0133 (4) | |
| C14 | 0.7201 (3) | 0.99764 (17) | 0.72442 (12) | 0.0127 (3) | |
| H14 | 0.5569 | 0.9958 | 0.7172 | 0.015* | |
| C15 | 0.9046 (3) | 1.05438 (17) | 0.66405 (12) | 0.0124 (3) | |
| C16 | 0.8998 (3) | 1.12626 (17) | 0.57456 (12) | 0.0126 (4) | |
| C17 | 1.0842 (3) | 1.20866 (18) | 0.53447 (13) | 0.0166 (4) | |
| H17 | 1.2131 | 1.2173 | 0.5651 | 0.020* | |
| C18 | 1.0791 (3) | 1.27779 (19) | 0.44998 (13) | 0.0192 (4) | |
| H18 | 1.2047 | 1.3334 | 0.4233 | 0.023* | |
| C19 | 0.8925 (3) | 1.26635 (19) | 0.40436 (13) | 0.0184 (4) | |
| H19 | 0.8903 | 1.3136 | 0.3465 | 0.022* | |
| C20 | 0.7089 (3) | 1.18527 (18) | 0.44379 (13) | 0.0180 (4) | |
| H20 | 0.5802 | 1.1772 | 0.4129 | 0.022* | |
| C21 | 0.7127 (3) | 1.11581 (18) | 0.52828 (12) | 0.0152 (4) | |
| H21 | 0.5861 | 1.0606 | 0.5547 | 0.018* |
| Se | 0.01551 (10) | 0.01235 (10) | 0.01832 (11) | −0.00120 (7) | −0.00576 (7) | −0.00192 (7) |
| O1 | 0.0237 (7) | 0.0152 (7) | 0.0177 (7) | −0.0024 (5) | −0.0049 (6) | −0.0032 (5) |
| N1 | 0.0117 (7) | 0.0131 (7) | 0.0145 (8) | −0.0021 (6) | −0.0051 (6) | −0.0002 (6) |
| N2 | 0.0108 (7) | 0.0180 (8) | 0.0185 (8) | −0.0012 (6) | −0.0056 (6) | −0.0015 (6) |
| N3 | 0.0125 (7) | 0.0174 (8) | 0.0155 (8) | −0.0012 (6) | −0.0040 (6) | −0.0011 (6) |
| C1 | 0.0338 (12) | 0.0244 (11) | 0.0210 (10) | −0.0045 (9) | −0.0057 (9) | −0.0090 (8) |
| C2 | 0.0193 (9) | 0.0138 (9) | 0.0147 (9) | −0.0045 (7) | 0.0008 (8) | 0.0010 (7) |
| C3 | 0.0252 (10) | 0.0148 (9) | 0.0200 (10) | −0.0012 (8) | 0.0030 (8) | −0.0017 (8) |
| C4 | 0.0218 (10) | 0.0165 (10) | 0.0282 (11) | 0.0032 (8) | 0.0033 (9) | 0.0028 (8) |
| C5 | 0.0182 (10) | 0.0219 (10) | 0.0265 (11) | 0.0008 (8) | −0.0053 (9) | 0.0021 (8) |
| C6 | 0.0182 (9) | 0.0181 (9) | 0.0218 (10) | −0.0020 (7) | −0.0031 (8) | −0.0024 (8) |
| C7 | 0.0148 (9) | 0.0112 (8) | 0.0168 (9) | −0.0014 (7) | 0.0006 (7) | 0.0014 (7) |
| C8 | 0.0142 (9) | 0.0152 (9) | 0.0168 (9) | 0.0021 (7) | −0.0053 (7) | −0.0016 (7) |
| C9 | 0.0177 (9) | 0.0185 (10) | 0.0200 (10) | −0.0012 (7) | −0.0018 (8) | 0.0020 (8) |
| C10 | 0.0228 (10) | 0.0273 (11) | 0.0139 (9) | 0.0043 (8) | −0.0026 (8) | 0.0031 (8) |
| C11 | 0.0243 (10) | 0.0285 (11) | 0.0154 (10) | 0.0017 (8) | −0.0081 (8) | −0.0020 (8) |
| C12 | 0.0178 (9) | 0.0205 (10) | 0.0179 (10) | −0.0017 (7) | −0.0074 (8) | −0.0017 (8) |
| C13 | 0.0129 (8) | 0.0135 (8) | 0.0126 (9) | 0.0018 (7) | −0.0029 (7) | 0.0006 (7) |
| C14 | 0.0129 (8) | 0.0135 (8) | 0.0129 (9) | −0.0002 (7) | −0.0056 (7) | −0.0021 (7) |
| C15 | 0.0110 (8) | 0.0123 (8) | 0.0148 (9) | −0.0003 (6) | −0.0031 (7) | −0.0043 (7) |
| C16 | 0.0122 (8) | 0.0121 (8) | 0.0127 (9) | 0.0015 (7) | −0.0007 (7) | −0.0022 (7) |
| C17 | 0.0139 (9) | 0.0183 (9) | 0.0183 (10) | −0.0031 (7) | −0.0036 (8) | −0.0022 (7) |
| C18 | 0.0178 (9) | 0.0187 (9) | 0.0191 (10) | −0.0047 (7) | 0.0002 (8) | 0.0018 (8) |
| C19 | 0.0199 (10) | 0.0193 (9) | 0.0136 (9) | 0.0020 (8) | 0.0000 (8) | 0.0012 (7) |
| C20 | 0.0168 (9) | 0.0208 (10) | 0.0174 (10) | −0.0006 (8) | −0.0060 (8) | −0.0021 (8) |
| C21 | 0.0134 (9) | 0.0160 (9) | 0.0163 (9) | −0.0032 (7) | −0.0023 (7) | −0.0018 (7) |
| Se—C8 | 1.9202 (19) | C8—C13 | 1.400 (2) |
| Se—C7 | 1.9224 (19) | C9—C10 | 1.388 (3) |
| O1—C2 | 1.368 (2) | C9—H9 | 0.9500 |
| O1—C1 | 1.434 (2) | C10—C11 | 1.387 (3) |
| N1—C14 | 1.351 (2) | C10—H10 | 0.9500 |
| N1—N2 | 1.365 (2) | C11—C12 | 1.387 (3) |
| N1—C13 | 1.433 (2) | C11—H11 | 0.9500 |
| N2—N3 | 1.313 (2) | C12—C13 | 1.388 (3) |
| N3—C15 | 1.369 (2) | C12—H12 | 0.9500 |
| C1—H1A | 0.9800 | C14—C15 | 1.378 (2) |
| C1—H1B | 0.9800 | C14—H14 | 0.9500 |
| C1—H1C | 0.9800 | C15—C16 | 1.467 (2) |
| C2—C3 | 1.388 (3) | C16—C21 | 1.392 (3) |
| C2—C7 | 1.404 (3) | C16—C17 | 1.402 (2) |
| C3—C4 | 1.389 (3) | C17—C18 | 1.390 (3) |
| C3—H3 | 0.9500 | C17—H17 | 0.9500 |
| C4—C5 | 1.380 (3) | C18—C19 | 1.385 (3) |
| C4—H4 | 0.9500 | C18—H18 | 0.9500 |
| C5—C6 | 1.390 (3) | C19—C20 | 1.388 (3) |
| C5—H5 | 0.9500 | C19—H19 | 0.9500 |
| C6—C7 | 1.388 (3) | C20—C21 | 1.390 (3) |
| C6—H6 | 0.9500 | C20—H20 | 0.9500 |
| C8—C9 | 1.393 (3) | C21—H21 | 0.9500 |
| C8—Se—C7 | 96.32 (8) | C11—C10—C9 | 119.82 (18) |
| C2—O1—C1 | 117.14 (16) | C11—C10—H10 | 120.1 |
| C14—N1—N2 | 110.78 (14) | C9—C10—H10 | 120.1 |
| C14—N1—C13 | 130.06 (15) | C12—C11—C10 | 119.69 (19) |
| N2—N1—C13 | 118.87 (15) | C12—C11—H11 | 120.2 |
| N3—N2—N1 | 106.67 (14) | C10—C11—H11 | 120.2 |
| N2—N3—C15 | 109.61 (14) | C11—C12—C13 | 120.24 (18) |
| O1—C1—H1A | 109.5 | C11—C12—H12 | 119.9 |
| O1—C1—H1B | 109.5 | C13—C12—H12 | 119.9 |
| H1A—C1—H1B | 109.5 | C12—C13—C8 | 120.86 (16) |
| O1—C1—H1C | 109.5 | C12—C13—N1 | 116.82 (16) |
| H1A—C1—H1C | 109.5 | C8—C13—N1 | 122.32 (16) |
| H1B—C1—H1C | 109.5 | N1—C14—C15 | 104.97 (16) |
| O1—C2—C3 | 125.05 (17) | N1—C14—H14 | 127.5 |
| O1—C2—C7 | 114.90 (17) | C15—C14—H14 | 127.5 |
| C3—C2—C7 | 120.05 (19) | N3—C15—C14 | 107.96 (16) |
| C2—C3—C4 | 119.93 (19) | N3—C15—C16 | 122.74 (15) |
| C2—C3—H3 | 120.0 | C14—C15—C16 | 129.29 (17) |
| C4—C3—H3 | 120.0 | C21—C16—C17 | 118.71 (17) |
| C5—C4—C3 | 120.32 (19) | C21—C16—C15 | 121.23 (16) |
| C5—C4—H4 | 119.8 | C17—C16—C15 | 120.06 (17) |
| C3—C4—H4 | 119.8 | C18—C17—C16 | 120.19 (18) |
| C4—C5—C6 | 120.0 (2) | C18—C17—H17 | 119.9 |
| C4—C5—H5 | 120.0 | C16—C17—H17 | 119.9 |
| C6—C5—H5 | 120.0 | C19—C18—C17 | 120.64 (17) |
| C7—C6—C5 | 120.45 (19) | C19—C18—H18 | 119.7 |
| C7—C6—H6 | 119.8 | C17—C18—H18 | 119.7 |
| C5—C6—H6 | 119.8 | C18—C19—C20 | 119.46 (18) |
| C6—C7—C2 | 119.22 (18) | C18—C19—H19 | 120.3 |
| C6—C7—Se | 125.27 (14) | C20—C19—H19 | 120.3 |
| C2—C7—Se | 115.50 (15) | C19—C20—C21 | 120.26 (18) |
| C9—C8—C13 | 117.89 (17) | C19—C20—H20 | 119.9 |
| C9—C8—Se | 117.98 (14) | C21—C20—H20 | 119.9 |
| C13—C8—Se | 123.97 (14) | C20—C21—C16 | 120.73 (17) |
| C10—C9—C8 | 121.44 (18) | C20—C21—H21 | 119.6 |
| C10—C9—H9 | 119.3 | C16—C21—H21 | 119.6 |
| C8—C9—H9 | 119.3 | ||
| C14—N1—N2—N3 | −0.75 (19) | C9—C8—C13—N1 | −177.53 (17) |
| C13—N1—N2—N3 | −175.16 (14) | Se—C8—C13—N1 | 7.1 (3) |
| N1—N2—N3—C15 | 0.31 (19) | C14—N1—C13—C12 | −133.19 (19) |
| C1—O1—C2—C3 | 2.6 (3) | N2—N1—C13—C12 | 40.0 (2) |
| C1—O1—C2—C7 | −178.26 (16) | C14—N1—C13—C8 | 46.3 (3) |
| O1—C2—C3—C4 | 179.81 (17) | N2—N1—C13—C8 | −140.54 (18) |
| C7—C2—C3—C4 | 0.7 (3) | N2—N1—C14—C15 | 0.86 (19) |
| C2—C3—C4—C5 | −0.9 (3) | C13—N1—C14—C15 | 174.46 (17) |
| C3—C4—C5—C6 | 0.4 (3) | N2—N3—C15—C14 | 0.2 (2) |
| C4—C5—C6—C7 | 0.2 (3) | N2—N3—C15—C16 | 179.29 (16) |
| C5—C6—C7—C2 | −0.5 (3) | N1—C14—C15—N3 | −0.65 (19) |
| C5—C6—C7—Se | −179.52 (14) | N1—C14—C15—C16 | −179.64 (17) |
| O1—C2—C7—C6 | −179.22 (16) | N3—C15—C16—C21 | 162.95 (17) |
| C3—C2—C7—C6 | 0.0 (3) | C14—C15—C16—C21 | −18.2 (3) |
| O1—C2—C7—Se | −0.1 (2) | N3—C15—C16—C17 | −17.9 (3) |
| C3—C2—C7—Se | 179.15 (13) | C14—C15—C16—C17 | 161.00 (18) |
| C13—C8—C9—C10 | −2.4 (3) | C21—C16—C17—C18 | −0.2 (3) |
| Se—C8—C9—C10 | 173.23 (15) | C15—C16—C17—C18 | −179.43 (17) |
| C8—C9—C10—C11 | 0.9 (3) | C16—C17—C18—C19 | 0.0 (3) |
| C9—C10—C11—C12 | 1.1 (3) | C17—C18—C19—C20 | 0.2 (3) |
| C10—C11—C12—C13 | −1.5 (3) | C18—C19—C20—C21 | −0.2 (3) |
| C11—C12—C13—C8 | 0.0 (3) | C19—C20—C21—C16 | 0.0 (3) |
| C11—C12—C13—N1 | 179.48 (17) | C17—C16—C21—C20 | 0.2 (3) |
| C9—C8—C13—C12 | 1.9 (3) | C15—C16—C21—C20 | 179.44 (17) |
| Se—C8—C13—C12 | −173.39 (15) |
| H··· | ||||
| C18—H18···O1i | 0.95 | 2.54 | 3.472 (2) | 165 |
| C14—H14···N3ii | 0.95 | 2.58 | 3.520 (2) | 170 |
| C10—H10··· | 0.95 | 2.82 | 3.630 (2) | 144 |
Hydrogen-bond geometry (, )
Cg1 is the centroid of the C1C6 ring.
|
|
| H |
|
|
|---|---|---|---|---|
| C18H18O1i | 0.95 | 2.54 | 3.472(2) | 165 |
| C14H14N3ii | 0.95 | 2.58 | 3.520(2) | 170 |
| C10H10 | 0.95 | 2.82 | 3.630(2) | 144 |
Symmetry codes: (i) ; (ii) ; (iii) .