Literature DB >> 25843265

A phenol-free method for isolation of microRNA from biological fluids.

Ivan A Zaporozhchenko1, Evgeniy S Morozkin2, Tatyana E Skvortsova2, Olga E Bryzgunova2, Anna A Bondar2, Ekaterina M Loseva2, Valentin V Vlassov2, Pavel P Laktionov2.   

Abstract

MicroRNAs (miRNAs) found in biological fluids such as blood and urine have been identified as promising biomarkers for many human disorders, including cancer, cardiopathies, and neurodegenerative diseases. However, circulating miRNAs are either encapsulated into vesicles or found in complexes with proteins and lipoproteins and, thus, require a special approach to their isolation. Acid phenol-chloroform extraction can solve this problem, but it is a labor-intensive procedure that relies heavily on the use of hazardous chemicals. Here we describe a fast and simple phenol-free protocol for miRNA isolation from biofluids. MiRNA is extracted from complexes with biopolymers by a high concentration of guanidine isothiocyanate combined with water/organic composition of solvents. Purification is finished using silica-based spin columns. Comparison of miRNA isolation from blood plasma and urine using the single-phase method and acid phenol-chloroform extraction by means of radioisotope spike-ins and quantitative real-time reverse transcription-polymerase chain reaction (qRT-PCR) showed similar performance of the two methods.
Copyright © 2015 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Blood plasma; Circulating miRNA; MiRNA isolation; Phenol free; Single phase; Urine

Mesh:

Substances:

Year:  2015        PMID: 25843265     DOI: 10.1016/j.ab.2015.03.028

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  8 in total

1.  Comparative Study of Extracellular Vesicles from the Urine of Healthy Individuals and Prostate Cancer Patients.

Authors:  Olga E Bryzgunova; Marat M Zaripov; Tatyana E Skvortsova; Evgeny A Lekchnov; Alina E Grigor'eva; Ivan A Zaporozhchenko; Evgeny S Morozkin; Elena I Ryabchikova; Yuri B Yurchenko; Vladimir E Voitsitskiy; Pavel P Laktionov
Journal:  PLoS One       Date:  2016-06-15       Impact factor: 3.240

2.  Plasma miR-19b and miR-183 as Potential Biomarkers of Lung Cancer.

Authors:  Ivan A Zaporozhchenko; Evgeny S Morozkin; Tatyana E Skvortsova; Anastasia A Ponomaryova; Elena Yu Rykova; Nadezhda V Cherdyntseva; Evgeny S Polovnikov; Oksana A Pashkovskaya; Evgeny A Pokushalov; Valentin V Vlassov; Pavel P Laktionov
Journal:  PLoS One       Date:  2016-10-21       Impact factor: 3.240

3.  Profiling of 179 miRNA Expression in Blood Plasma of Lung Cancer Patients and Cancer-Free Individuals.

Authors:  Ivan A Zaporozhchenko; Evgeny S Morozkin; Anastasia A Ponomaryova; Elena Y Rykova; Nadezhda V Cherdyntseva; Aleksandr A Zheravin; Oksana A Pashkovskaya; Evgeny A Pokushalov; Valentin V Vlassov; Pavel P Laktionov
Journal:  Sci Rep       Date:  2018-04-20       Impact factor: 4.379

4.  A lab-on-a-chip for rapid miRNA extraction.

Authors:  Ole Behrmann; Matthias Hügle; Peter Bronsert; Bettina Herde; Julian Heni; Marina Schramm; Frank T Hufert; Gerald A Urban; Gregory Dame
Journal:  PLoS One       Date:  2019-12-19       Impact factor: 3.240

5.  Electroosmotic Flow Behavior of Viscoelastic LPTT Fluid in a Microchannel.

Authors:  Dilin Chen; Jie Li; Haiwen Chen; Lai Zhang; Hongna Zhang; Yu Ma
Journal:  Micromachines (Basel)       Date:  2019-12-15       Impact factor: 2.891

6.  Phenol/Chloroform-Free TiO2-Based miRNA Extraction from Cell Lysate.

Authors:  Denisa Smela; Eliska Zelinkova; Pavel Rehulka; Zuzana Bilkova; Rudolf Kupcik
Journal:  Int J Mol Sci       Date:  2022-08-09       Impact factor: 6.208

Review 7.  Isolation of Cell-Free miRNA from Biological Fluids: Influencing Factors and Methods.

Authors:  Olga Bryzgunova; Maria Konoshenko; Ivan Zaporozhchenko; Alexey Yakovlev; Pavel Laktionov
Journal:  Diagnostics (Basel)       Date:  2021-05-11

8.  A microRNA isolation method from clinical samples.

Authors:  Sepideh Zununi Vahed; Abolfazl Barzegari; Yalda Rahbar Saadat; Somayeh Mohammadi; Nasser Samadi
Journal:  Bioimpacts       Date:  2016-03-28
  8 in total

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