| Literature DB >> 25841058 |
Marek Gabriško1, Štefan Janeček2.
Abstract
Proteins from the glycoside hydrolase family 3 (GH3) are important bacterial, fungal and plant enzymes involved in cell wall remodeling, energy metabolism and pathogen defense but no animal GH3 proteins have been reported so far. In presented work we use the in silico approach to describe putative GH3 proteins of animals. Based on tertiary structure modeling, domain organization and transcriptomics data analysis, presence of catalytic and substrate binding residues and evolutionary relationship inference, we assume that there is a monophyletic group of GH3 enzymes (probably β-xylosidases) found in various animal taxa with possible role in development.Keywords: Animal embryogenesis; Bioinformatics; Family GH3; Molecular evolution; β-Glucosidases/β-xylosidases
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Year: 2015 PMID: 25841058 DOI: 10.1016/j.carres.2015.02.004
Source DB: PubMed Journal: Carbohydr Res ISSN: 0008-6215 Impact factor: 2.104