Literature DB >> 25837850

Metallophosphoesterases: structural fidelity with functional promiscuity.

Nishad Matange1, Marjetka Podobnik2, Sandhya S Visweswariah1.   

Abstract

Calcineurin-like metallophosphoesterases (MPEs) form a large superfamily of binuclear metal-ion-centre-containing enzymes that hydrolyse phosphomono-, phosphodi- or phosphotri-esters in a metal-dependent manner. The MPE domain is found in Mre11/SbcD DNA-repair enzymes, mammalian phosphoprotein phosphatases, acid sphingomyelinases, purple acid phosphatases, nucleotidases and bacterial cyclic nucleotide phosphodiesterases. Despite this functional diversity, MPEs show a remarkably similar structural fold and active-site architecture. In the present review, we summarize the available structural, biochemical and functional information on these proteins. We also describe how diversification and specialization of the core MPE fold in various MPEs is achieved by amino acid substitution in their active sites, metal ions and regulatory effects of accessory domains. Finally, we discuss emerging roles of these proteins as non-catalytic protein-interaction scaffolds. Thus we view the MPE superfamily as a set of proteins with a highly conserved structural core that allows embellishment to result in dramatic and niche-specific diversification of function.

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Year:  2015        PMID: 25837850     DOI: 10.1042/BJ20150028

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  26 in total

1.  Design, Synthesis, and Properties of Phosphoramidate 2',5'-Linked Branched RNA: Toward the Rational Design of Inhibitors of the RNA Lariat Debranching Enzyme.

Authors:  Nobuhiro Tago; Adam Katolik; Nathaniel E Clark; Eric J Montemayor; Kohji Seio; Mitsuo Sekine; P John Hart; Masad J Damha
Journal:  J Org Chem       Date:  2015-09-30       Impact factor: 4.354

Review 2.  Making and Breaking of an Essential Poison: the Cyclases and Phosphodiesterases That Produce and Degrade the Essential Second Messenger Cyclic di-AMP in Bacteria.

Authors:  Fabian M Commichau; Jana L Heidemann; Ralf Ficner; Jörg Stülke
Journal:  J Bacteriol       Date:  2018-12-07       Impact factor: 3.490

3.  Crystal structure of the Entamoeba histolytica RNA lariat debranching enzyme EhDbr1 reveals a catalytic Zn2+ /Mn2+ heterobinucleation.

Authors:  Elizabeth Ransey; Eduardo Paredes; Sourav K Dey; Subha R Das; Annie Heroux; Mark R Macbeth
Journal:  FEBS Lett       Date:  2017-06-14       Impact factor: 4.124

4.  Activity and structure of Pseudomonas putida MPE, a manganese-dependent single-strand DNA endonuclease encoded in a nucleic acid repair gene cluster.

Authors:  Anam Ejaz; Yehuda Goldgur; Stewart Shuman
Journal:  J Biol Chem       Date:  2019-03-20       Impact factor: 5.157

5.  Group B Streptococcus Degrades Cyclic-di-AMP to Modulate STING-Dependent Type I Interferon Production.

Authors:  Warrison A Andrade; Arnaud Firon; Tobias Schmidt; Veit Hornung; Katherine A Fitzgerald; Evelyn A Kurt-Jones; Patrick Trieu-Cuot; Douglas T Golenbock; Pierre-Alexandre Kaminski
Journal:  Cell Host Microbe       Date:  2016-07-13       Impact factor: 21.023

6.  Structural insights into phosphopantetheinyl hydrolase PptH from Mycobacterium tuberculosis.

Authors:  John Mosior; Ronnie Bourland; Shivatheja Soma; Carl Nathan; James Sacchettini
Journal:  Protein Sci       Date:  2020-01-20       Impact factor: 6.725

7.  Manganese Is Essential for PlcP Metallophosphoesterase Activity Involved in Lipid Remodeling in Abundant Marine Heterotrophic Bacteria.

Authors:  Tao Wei; Mussa Quareshy; Yu-Zhong Zhang; David J Scanlan; Yin Chen
Journal:  Appl Environ Microbiol       Date:  2018-07-17       Impact factor: 4.792

8.  Metal dependence and branched RNA cocrystal structures of the RNA lariat debranching enzyme Dbr1.

Authors:  Nathaniel E Clark; Adam Katolik; Kenneth M Roberts; Alexander B Taylor; Stephen P Holloway; Jonathan P Schuermann; Eric J Montemayor; Scott W Stevens; Paul F Fitzpatrick; Masad J Damha; P John Hart
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-06       Impact factor: 11.205

9.  Mutation of Conserved Mre11 Residues Alter Protein Dynamics to Separate Nuclease Functions.

Authors:  Samiur Rahman; Mahtab Beikzadeh; Marella D Canny; Navneet Kaur; Michael P Latham
Journal:  J Mol Biol       Date:  2020-04-01       Impact factor: 5.469

10.  Characterization of Lhr-Core DNA helicase and manganese- dependent DNA nuclease components of a bacterial gene cluster encoding nucleic acid repair enzymes.

Authors:  Anam Ejaz; Stewart Shuman
Journal:  J Biol Chem       Date:  2018-09-17       Impact factor: 5.157

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